Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03258 ATGTTCAATAAATGGCAAGCTCAAAGATGGTGGGGTGAGAATTATGACAGAATCATGGAACTTTATAACGTCCAGAGATTTAATCGACAAGCTCTTAACACTCCTCCAAGATCTGAGGATGAGCAAAGAGATTCTTCTTACTCAAGATTGACATCTGCACAAGAAAGCCCCATGGCCTCAAACAAGGATTGGACACCGAGGAGTCACTACAAACCCTCTGTGAACAGAGGATTTTACCCCTCTGAACCGTTGGATCACGGTGGTGGCCACCAGTTCCATGCAGGGTCGTCTATGGAGCCATCAAGGTCAACCACCGCTTCTAGGGATGAGCCTTCTATTAGCAATGCCAGTGAAATGGAGTCAGAATGGGTAGAGCAAGATGAGCCTGGAGTTTACATCACAATCAGACAGTTAGCTGATGGGACAAGGGAGCTAAGACGTGTCAGATTCAGCCGGGAAAGATTTGGGGAGGTAAATGCAAAAACTTGGTGGGAAGAGAACAGAGAGAGAATACAAGCTCAATACCTTTAA 531 0.4576 MFNKWQAQRWWGENYDRIMELYNVQRFNRQALNTPPRSEDEQRDSSYSRLTSAQESPMASNKDWTPRSHYKPSVNRGFYPSEPLDHGGGHQFHAGSSMEPSRSTTASRDEPSISNASEMESEWVEQDEPGVYITIRQLADGTRELRRVRFSRERFGEVNAKTWWEENRERIQAQYL. 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03258 176 MobiDBLite consensus disorder prediction 96 120 - -
Seca12g03258 176 MobiDBLite consensus disorder prediction 32 125 - -
Seca12g03258 176 MobiDBLite consensus disorder prediction 47 68 - -
Seca12g03258 176 ProSiteProfiles BRX domain profile. 1 23 IPR013591 -
Seca12g03258 176 Pfam Transcription factor regulating root and shoot growth via Pin3 1 22 IPR013591 -
Seca12g03258 176 Pfam Transcription factor regulating root and shoot growth via Pin3 120 175 IPR013591 -
Seca12g03258 176 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 176 IPR044532 -
Seca12g03258 176 ProSiteProfiles BRX domain profile. 121 176 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03258 Seca-Chr12 67005375 67006858 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g03258 1 176 Major Intrinsic Protein MIP AT1G31880 68.333 9.01e-81 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03258 - - gmx:100785003 337.035