Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03233 ATGAGGCCTCGCAGAGACACCGATAATAGGCGCATATTCACTTTTCATTCTCACCAATCAACCAATTCACCAGACTCCGAATCGCCGCGGCGGAGAAGCGCGTTGTTCTCACGGAGATTGTTTGTTGCTTTGATGGCAGGTCAATCGCGGAAATGGATGATCCTTGTGGCCACAATTTGGATTCAGGCATTCACGGGAACCAATTTCGATTTCTCTCAGTACTCATCGTCGTTGAAATCAGCACTCAATATCTCACAGGTTCAGCTTAACTACCTCGCCACCGCAAACGACATGGGAAAGGTTTTCGGTTGGTCGTCTGGACTCGCACTCATGTACCTTCCTCTCTCTGTTGTTATGTTCATCGCTGCTTTCATGGGTTTCCTTGGCTATGGCCTTCAGTGGCTCCTCATCAACCATGTCATCAATTTGCCTTATTTTCTGGTCTTTCTTCTATGTCTTTTGGGTGGCTGTAGCATCTGTTGGTTCAACACAGTATGTTTTGTTCTTTGCATTAGGAATTTCCCAGTTAACCGAACCCTTGCATTATCACTCACTGTGAGTTTTAATGGTGTTAGTGCAGCACTCTACACCCTTGCTGCCAATTCAATAGACCCTTCATCCGATGCATTGTATCTGCTTTTGAATGCCCTTGTTCCCCTTATCATTTGCATTGCAGCACTCATTCCCATTCTTCGCCAACCAGCTTTAGACCCTCTACCTCCTGATGCAGTAAACCGGGACTCTCTGATATTTCTAATATTAAACATCTTAGCCATTTTCACTGGACTTTATCTCCTCCTGTTTGGCTCATCTGCTTCTTCCGTGACTTCAGCTCGCCTCCACTTTGGTGGAGCTATTTTCCTCCTCATCTTCCCATTATGTATCCCTGGCATTATATATGCTCGGGCTTGGTTTCGGCGTGCCATCCATTCCAGCTTCCGAATAGAAGGCTCCAGCTTCATTCTTGTTCATGATGATGATCTTGAGCTGCATAAAGAACTCCTTAGCCGTCACAATAGTAGTATTGTTGGCAATGGAGATACTTATAGCCTGCTAAGTGAAAATGGATCCATGTTTGAAAGTCAGAAGGCAAAAGATAGTAGTGATGTGTGTTGTGACAAGATGATTGACCAGGATCAGTTGGCAATGCTAGGAGAAGAACACCCTGCTGCAGTGATTGTCCGCAGATTGGATTTTTGGCTATACTACATTACATACTTCTGTGGAGGTACAATTGGTCTTGTCTATAGCAATAATCTGGGACAGATTGCCCAATCTCTGGGCCTGAGTTCAAGTACTTCTACTCTTGTCACACTCTATGCATCCTTTTCCTTCTTTGGTCGCTTGCTTTCAGCTGGACCAGACTATATTCGCGATAAATTCTACTTTGCAAGGACCGTTTGGCTATCCATTGCACTTATTCCAACACCAATTGCATTCTTGTTGCTTGCTGCATCAGATAGTCCTCTGGCACTGCATACAGGCACTGCACTAATTGGGTTGAGTTCTGGTTTCATATTTGCTGCTGCTGTATCAGTTACATCTGAGCTGTTTGGACCTAACAATGTGGGCGTCAATCACAACATTCTCATAACAAATATCCCAATTGGATCACTTCTCTATGGTTTTCTTGCTGCACTAGTTTATGATGCCAATGCACATTTAATACCAGGAAACTTGATAACGTCTGACTCAGTAGTGTGCATGGGAAGGGAGTGTTACTTCTGGACATTTGTCTGGTGGGCATGCATATCTGTCGTGGGACTAGTTTCTAGTGTGCTGCTATTCTTAAGAACAAAACATGCATATGATCATTTTGAGAAACACCGCATTTCAACACAATCGATTGTGTCTTAA 1857 0.44 MRPRRDTDNRRIFTFHSHQSTNSPDSESPRRRSALFSRRLFVALMAGQSRKWMILVATIWIQAFTGTNFDFSQYSSSLKSALNISQVQLNYLATANDMGKVFGWSSGLALMYLPLSVVMFIAAFMGFLGYGLQWLLINHVINLPYFLVFLLCLLGGCSICWFNTVCFVLCIRNFPVNRTLALSLTVSFNGVSAALYTLAANSIDPSSDALYLLLNALVPLIICIAALIPILRQPALDPLPPDAVNRDSLIFLILNILAIFTGLYLLLFGSSASSVTSARLHFGGAIFLLIFPLCIPGIIYARAWFRRAIHSSFRIEGSSFILVHDDDLELHKELLSRHNSSIVGNGDTYSLLSENGSMFESQKAKDSSDVCCDKMIDQDQLAMLGEEHPAAVIVRRLDFWLYYITYFCGGTIGLVYSNNLGQIAQSLGLSSSTSTLVTLYASFSFFGRLLSAGPDYIRDKFYFARTVWLSIALIPTPIAFLLLAASDSPLALHTGTALIGLSSGFIFAAAVSVTSELFGPNNVGVNHNILITNIPIGSLLYGFLAALVYDANAHLIPGNLITSDSVVCMGRECYFWTFVWWACISVVGLVSSVLLFLRTKHAYDHFEKHRISTQSIVS. 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03233 618 Gene3D MFS general substrate transporter like domains 9 230 IPR036259 -
Seca12g03233 618 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 52 604 - -
Seca12g03233 618 SUPERFAMILY MFS general substrate transporter 49 601 IPR036259 -
Seca12g03233 618 Gene3D MFS general substrate transporter like domains 394 607 IPR036259 -
Seca12g03233 618 Pfam Nodulin-like 51 296 IPR010658 -
Seca12g03233 618 ProSiteProfiles Major facilitator superfamily (MFS) profile. 397 618 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03233 Seca-Chr12 66181793 66186723 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g03233 1 615 Nodulin-like Gene Family AT1G31470 55.949 0.0 613
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03233 - - cam:101496594 994.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g03233 12 66181793 66186723 Seca12g03233 12 66181793 66186723 ECH