Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03231 ATGCATTGGTTTATTATCGACTTCTACTTGTTGGATTGGTGCAGACTAGAATATACAAGAATGGACAAATGGTTAAGTCTTCTATTATGTATGCTGCTATTACTAAAGGCAGAAGGGGTTACTGTGCCAATCACTTATGTTCAAAGTGCGGTACCAAAAGGAGCTGTCTGTTTGGATGGGAGCCCACCAGCTTACCACTTCCATAAGGGATTTGGGGCAGGGATTGACAACTGGATAGTTCACTTTGAGGGAGGAGGATGGTGCAATAATGTCACTACTTGCCTTGACCGTAGGGACACTCGTTTAGGTTCATCTAAGAAAATGGACACGCAACTTTCCTTCTCTGGATTTTTTAGTGACAAGCAAAAGTTTAATCCAGATTTCTACAATTGGAACAGAATCAAGGTTAGGTATTGTGATGGGTCATCATTTACTGGTGATGTTGAAGCTGTCGATCCAAAAACCAACTTGCACTTCAGAGGAGGAAGGATTTTTGTTGCTGTCGTTGAGGATTTGCTAGCAAAAGGAATGAAAAATGCTAAAAATGCAATTCTCTCTGGATGTTCAGCTGGAGGATTGACTTCTATTTTACAATGTGATCGCTTCAAATCTCTACTACCTACAGCAGCTAAAGTGAAATGTCTTTCAGATGCTGGTTATTTTATCAATGTAAAGGATGTCTCTGGAGCGCAACATATTGAAGAGTTATACAGTCAAGTCGTTCAAACACATGGCTCAGCTAAAAATTTGCCTCCATCCTGCACTTCAAGACTCAGACCAGGGCTGTGCTTTTTCCCGCAAAATGTGGCAGCACAAATCAGTACACCAATCTTCTTTGTTAATGCGGCCTATGACTCATGGCAGATTAAGAACATTTTGGCACCGGGTGTTGCTGATCCCCATGGCACTTGGCGTGAGTGCAAGCTTGATATCAAAAACTGCTCTCCTAATCAATTGAGTGTAATGCAAGGCTTCAGGACTGATTTCTTAAAGGCAATTAGTGTGGTTGGCAACTCTCCACCTAAAGGAATGTTCATAGATGGTTGTTATGCTCACTGCCAAACTGGAATGCAGGAGACATGGTTGAGAAGTGATTCTCCAGTGGTGGCTAAGACTACAATGGCAAAGGCTGTGGGAGATTGGTTTTATGACCGAAGATCTTTCAGTCAGATAGATTGCGCTTACCCTTGCAACCCTACTTGCCATAACCGTGTTTTTGATCAAAACAAGCTTCCAGAAGTTTAG 1245 0.4209 MHWFIIDFYLLDWCRLEYTRMDKWLSLLLCMLLLLKAEGVTVPITYVQSAVPKGAVCLDGSPPAYHFHKGFGAGIDNWIVHFEGGGWCNNVTTCLDRRDTRLGSSKKMDTQLSFSGFFSDKQKFNPDFYNWNRIKVRYCDGSSFTGDVEAVDPKTNLHFRGGRIFVAVVEDLLAKGMKNAKNAILSGCSAGGLTSILQCDRFKSLLPTAAKVKCLSDAGYFINVKDVSGAQHIEELYSQVVQTHGSAKNLPPSCTSRLRPGLCFFPQNVAAQISTPIFFVNAAYDSWQIKNILAPGVADPHGTWRECKLDIKNCSPNQLSVMQGFRTDFLKAISVVGNSPPKGMFIDGCYAHCQTGMQETWLRSDSPVVAKTTMAKAVGDWFYDRRSFSQIDCAYPCNPTCHNRVFDQNKLPEV. 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03231 414 PANTHER NOTUM-RELATED 26 403 IPR004963 GO:0016787
Seca12g03231 414 Pfam Pectinacetylesterase 36 386 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03231 Seca-Chr12 65981716 65986409 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g03231 20 414 Carbohydrate Esterase AT4G19420 57.907 0.0 542
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03231 K19882 - gmx:100781246 721.079