Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03229 ATGGAGTGTGCAAGAATCACCCAATGGCTAAATCTTCTACTATGTGCATTTCTATTGCTAAAGGCTGAAGGAGATTTTATTCCACTCACCCTTGTTGAGAATGCCGTATCAAAAGGAGCTGTTTGTTTGGATGGCAGTCCCCCAGCTTACCACCTTGATAACGGATTTGGAGAAGGAATTAACAGCTGGATTGTTCACATTGAGGGAGGGGGATGGTGTGAAAGTGTCACTACTTGCCTTAACCGTAAGGACACTCGTTTAGGTTCATCTAACCAAATGGTTGAGCAAATTGCCTTTTCTGGATATCTAAGTAATGATAAACAGTTTAATCCAGATTTCTATAATTGGAACAGAGTCAAGATTAGGTACTGTGATGGGGCATCATTTACTGGTGATGTGGAAAAAGTTGATCCAACAACCAACTTGCACTTCAGAGGAGCAAGGGTTTTTGTTGCTGTAATAGAAGATTTACTAGCGAAAGGAATGGAAAATGCTGAAAATGCTATTCTTTCTGGATGTTCAGCTGGAGGATTGGCTACTATATTGAATTGTGATCGCTTTAAAGCACTATTACCTGCAGGAGCTAAAGTAAAATGTGTTTCAGATGCTGGTTATTTTATCAATGTAAAGGATATCTCAGGAGCACAACACATTGAAGAGTTCTACAAGCAAGTTGTTACAACACATGGCTCAGCAAAGCATTTGCCTCCTTCCTGCACTTCAAGACTCAGTCCAGAGTTGTGCTTTTTCCCCCAAAATATGGCATCAGAAATCAGCGCACCAATCTTCTTGGTAAATGCAGCCTATGACTCATGGCAGATTAAGAACATCTTAGCACCAGGTGTAGCTGATCCCCATGGCCTTTGGCGTAACTGCAAGCTTGATATAAACAACTGCTCACCTGACCAACTAAGTATAATGCAAGGTTAA 930 0.4108 MECARITQWLNLLLCAFLLLKAEGDFIPLTLVENAVSKGAVCLDGSPPAYHLDNGFGEGINSWIVHIEGGGWCESVTTCLNRKDTRLGSSNQMVEQIAFSGYLSNDKQFNPDFYNWNRVKIRYCDGASFTGDVEKVDPTTNLHFRGARVFVAVIEDLLAKGMENAENAILSGCSAGGLATILNCDRFKALLPAGAKVKCVSDAGYFINVKDISGAQHIEEFYKQVVTTHGSAKHLPPSCTSRLSPELCFFPQNMASEISAPIFLVNAAYDSWQIKNILAPGVADPHGLWRNCKLDINNCSPDQLSIMQG. 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03229 309 Pfam Pectinacetylesterase 21 309 IPR004963 GO:0016787
Seca12g03229 309 PANTHER NOTUM-RELATED 14 309 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03229 Seca-Chr12 65939499 65950715 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g03229 5 308 Carbohydrate Esterase AT4G19420 66.118 6.71e-163 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03229 K19882 - cit:102628021 499.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g03229 12 65939499 65950715 Seca12g03229 12 65939499 65950715 ECH