Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03219 ATGGAGATGTATAGGAAGATAAGCAAAGCAGAGTTTACATGTCCTAAATGGTTCCTAAGAGAAGTTAAGAGGCTATTGTACAAGATGTTGGATCCAAATCCTGACATTAGGATTTCCTTAGCTAAGATTAAGCAATGTTCTTGGTTTATGAAAGGGCCAAATAGTAGACAACAAAAACAAGATGGGGAAAATAGGAATGTCTCTCCTGTGACCATAAATCATTCTGATCAAGGTGATGAAAGTGATGAACTAGCAGCACAAGCAAGGCAAGAGCCAGTGGTGCCTATAAGTATAAATGCCTTTGATATCATCTCACTTTCCTCTGGGTTTAATCTATGTGGATTCTTTGAAGACAGCTTTCAGAAAAGGGAAGCAAGATTTACTTCAAGACAACCTGCATCAGTCATCATCTCCAGGCTGGAAAAGATTGCTAAGAGACTGAAGCTTAAAATACAGAAAAGAGCTGCTGGTTTGTTGAAATTGGAGAGCCTTGGTGAAGGTAGGAAGGGGATTTTATCCATTGATGCAGAGATCTTTGAGGTTACTCCATTTTTCCATTTGGTGGAAGTGAAAAAATCAAATGGGGATACATTGGAATATCAGAAAATAATGAAAGAGGATATAAGGCCTGCTCTTCAAGATATTGTTTGGGTTTGGCGAGGTGATCAACAAGAGCAATTGCAACAGTCAGAGCAGCAGCAGCAGCAGCAGCAACAATCACAGTGA 726 0.3967 MEMYRKISKAEFTCPKWFLREVKRLLYKMLDPNPDIRISLAKIKQCSWFMKGPNSRQQKQDGENRNVSPVTINHSDQGDESDELAAQARQEPVVPISINAFDIISLSSGFNLCGFFEDSFQKREARFTSRQPASVIISRLEKIAKRLKLKIQKRAAGLLKLESLGEGRKGILSIDAEIFEVTPFFHLVEVKKSNGDTLEYQKIMKEDIRPALQDIVWVWRGDQQEQLQQSEQQQQQQQQSQ. 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03219 241 MobiDBLite consensus disorder prediction 52 75 - -
Seca12g03219 241 Gene3D Kinase associated domain 1, KA1 98 218 - -
Seca12g03219 241 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 1 212 - -
Seca12g03219 241 Coils Coil 220 240 - -
Seca12g03219 241 SUPERFAMILY Protein kinase-like (PK-like) 2 57 IPR011009 -
Seca12g03219 241 CDD CIPK_C 99 213 - -
Seca12g03219 241 Pfam NAF domain 95 153 IPR004041 GO:0007165
Seca12g03219 241 Gene3D Transferase(Phosphotransferase) domain 1 1 97 - -
Seca12g03219 241 ProSiteProfiles NAF domain profile. 93 117 IPR018451 GO:0007165
Seca12g03219 241 MobiDBLite consensus disorder prediction 52 84 - -
Seca12g03219 241 FunFam Non-specific serine/threonine protein kinase 93 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03219 Seca-Chr12 65713462 65714187 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g03219 1 236 CBL-interacting serine-threonine protein kinases AT5G58380 55.118 1.90e-85 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03219 - K07198 gmx:100779316 358.607