Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03209 ATGAAAGCCTTCCCTACTCTTCATATTCCTCCTGGACCTTTCCACCTTCCCATCATCACCGACATCCTTTGGCTAAAAACTTCATTCTCTGAACTCCGGCTAATTCTTCGAAACCTCCATGCCAAATATGGTCCAATGATCACTATCCATTTTTTGTCCACTCCCCATATTTCCATAAAAGATCGGTCCCTTGCCCACGAGGCTTTAATTAAAAAAGGTGCTATCTTTGCAAACCGCCCCAAAATCCTTTCTAACAAATTTGCTACCAACAATAACCAACTCAACATCACTTCCTCCTTCTATGGCCCCACATGGCGTGTCCTTCGCCGCAACCTCACCTCCGTAATGCTTCACCCCTCGCAAATTAGATCCTTTTCTAGCATCCGCAAGTGGGTCTTGGATTACCTTGTAATTCAATTGAAATCTGATGCAAAATCAAGGCATTCCGTTAAGGTCATCGACCATGTTCATCATGTCATGTTTTGCTTGCTAGTCTTCATGTGTGTCGGGGAAAAAATTGATGACAAGAAAATCAAAGACATCAAACATGTCCAACATCGTTTGATTTCGAGCTTTAGTAGATTCAGTGCACTAAATCTCTTTCCAACTATGATCTCTCGCATTTTGTTCCCAAAACGTTGGCAGGAGTTGTTGGGCCTACAGAAGGCCCAAGAAGATATTTTGGCTCAACTAATAAGAGCAAGAAAAAGGGCTACAAAAAACAAGGAGGATAATGATCCTAATGAAAGTGTTATTTGTTATGTGGATACTTTGTTGAATTTGGAGTTGCTTGAGGAGAAACGCAAACTTGATGAGAGTGAAATTGTATCACTATGTTCAGAGTTTCTCACGAGTGGTACAGATACAACTTCTACATTAATAGAGTGGGTTATGGCAAAATTTGTTGTGGGTGATAGAGAGGAAAAAGAAGTGAAAGAGGAAGATCTACAGAAGTTGCCATATCTCAAGGCTGTGATTTTGGAAGGCCTAAGGCTTCACCCTCCTTCATATTTTGTGGTTCCACATGCAGTGACTGAGGATGTGGTTTTCAATGGTTACTTGGTTCCTAAAAATGCAACAGTGAATTTTATGGTAGCAGAGATGGGTTTGGATCCAATGGTGTGGGAGGACTCAATGAAATTCAAGCCGGAGAGGTTTTTTAGAGGTGAGAATGAATTTGAAGCATTTGATATTACTGGGAACAAAGAGATAAAGATGATGCCGTTTGGAGCAGGGAGAAGAATTTGCCCTGCTTATAACTTAGCAATGCGCCATTTGGAGTACTTTGTGGCAAATTTGGTTTGGAATTTTGAATGGAAGACTTCACTTGAGAGTAAAGTTGATCTGTCATCAACAAAACAAGAATTTACTCTGATGATGAAACATCCATTACAAGCTCAAATTTCTCCTAGGATTTATTCTCATCTCTGA 1431 0.4039 MKAFPTLHIPPGPFHLPIITDILWLKTSFSELRLILRNLHAKYGPMITIHFLSTPHISIKDRSLAHEALIKKGAIFANRPKILSNKFATNNNQLNITSSFYGPTWRVLRRNLTSVMLHPSQIRSFSSIRKWVLDYLVIQLKSDAKSRHSVKVIDHVHHVMFCLLVFMCVGEKIDDKKIKDIKHVQHRLISSFSRFSALNLFPTMISRILFPKRWQELLGLQKAQEDILAQLIRARKRATKNKEDNDPNESVICYVDTLLNLELLEEKRKLDESEIVSLCSEFLTSGTDTTSTLIEWVMAKFVVGDREEKEVKEEDLQKLPYLKAVILEGLRLHPPSYFVVPHAVTEDVVFNGYLVPKNATVNFMVAEMGLDPMVWEDSMKFKPERFFRGENEFEAFDITGNKEIKMMPFGAGRRICPAYNLAMRHLEYFVANLVWNFEWKTSLESKVDLSSTKQEFTLMMKHPLQAQISPRIYSHL. 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03209 476 FunFam Cytochrome P450 family protein 4 473 - -
Seca12g03209 476 SUPERFAMILY Cytochrome P450 10 471 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g03209 476 Pfam Cytochrome P450 10 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g03209 476 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 10 463 - -
Seca12g03209 476 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 409 418 IPR017972 GO:0005506|GO:0016705
Seca12g03209 476 Gene3D Cytochrome P450 5 475 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g03209 476 CDD CYP77_89 42 465 - -
Seca12g03209 476 PRINTS E-class P450 group I signature 364 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g03209 476 PRINTS E-class P450 group I signature 416 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g03209 476 PRINTS E-class P450 group I signature 406 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g03209 476 PRINTS E-class P450 group I signature 274 291 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g03209 476 PRINTS E-class P450 group I signature 40 59 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g03209 476 PRINTS E-class P450 group I signature 64 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g03209 476 PRINTS E-class P450 group I signature 323 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g03209 476 PRINTS P450 superfamily signature 285 302 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g03209 476 PRINTS P450 superfamily signature 407 416 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g03209 476 PRINTS P450 superfamily signature 324 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03209 Seca-Chr12 65489129 65490608 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g03209 3 471 Cytochrome P450 AT1G64940 50.509 2.58e-173 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03209 K24184 - gmx:100805244 556.984