Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03200 ATGGTCCCGGAATATGAATCTGGCAATTTTATTGGCCCAACCATCTTATCAGATGTGACTCCTAACATGGAGTGCTACAAGGAGGAAATTTTTGGCCCAGTTCTTCTTTCAATGGAGTTGGACCAGGCTGGCATCAACGTTCCCATTCCAGTTCCTTTGCCCTTTTTCTCATTTACTGGCAACAAGGCATCATTTGCCGGGGATTTCAATTTCTATGGTAGAGTTGTTGAACAAGTTGAAGTTGAGTATGTCCCAGAGAATGCAGAGCTAGATGAAGGTTTGGATGAAGAATTTAGAAAAATCTTCGAGAAATTTAGTTTTGGCGAGGTTACTGGTTCAGAGGATAATGATAAGAAGGATGAGTCAGCAGAAAATGAAACTATTAATAAGAAGACAGACTCTGATGATTCTGATGAGGAAGAAAATGATAATGAGCAAAAAGAGAAAGGCATCTCAAACAAGAAGAAAAAGCTTCAGCAGATCCGAAGTTGCTGGTGTTCTTGA 504 0.4008 MVPEYESGNFIGPTILSDVTPNMECYKEEIFGPVLLSMELDQAGINVPIPVPLPFFSFTGNKASFAGDFNFYGRVVEQVEVEYVPENAELDEGLDEEFRKIFEKFSFGEVTGSEDNDKKDESAENETINKKTDSDDSDEEENDNEQKEKGISNKKKKLQQIRSCWCS. 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03200 167 SUPERFAMILY ALDH-like 5 71 IPR016161 GO:0016491
Seca12g03200 167 Coils Coil 137 157 - -
Seca12g03200 167 Pfam Aldehyde dehydrogenase family 4 40 IPR015590 GO:0016491
Seca12g03200 167 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 2 42 IPR010061 GO:0004491
Seca12g03200 167 MobiDBLite consensus disorder prediction 110 167 - -
Seca12g03200 167 MobiDBLite consensus disorder prediction 110 135 - -
Seca12g03200 167 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 1 45 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03200 Seca-Chr12 65188446 65190123 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g03200 1 76 Aldehyde Dehydrogenase Gene Family AT2G14170 54.386 6.92e-33 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03200 - - gmx:100797656 140.584