Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03199 ATGAGGGGAAGCTTGATTATTTGTGTTGTTTTACTCTGCTTGGATAGAAAAATAGATAGAAGAGGACAATATAATATGGGGGCTAAAAATCATGCAATTGTCATGCCAGATGCAAATGTTGATGCTACTCTAAATGCTTTAGTTGCTGCTGGTTTTGGTGCAGCTGGACAAAGGTGGATGGCTCTCAGCACAGTTGTTTTTGTTGAAGGCTCACAATCATGGTATCATACTCTATTCTCTATTTACATTTCTCAAATATCCTTATTGGTTGCACAGGCAAAGGAGCGAATACACAAATTAGTTCAATCTGGGGTTGAAAGTGGTGCCAAACTTCTGCTTGATGGAAGAAATATAGTGGTAGCATTTATTTCCTCAACTGCCTTTTTCAAACATTGTGGTTGCATATAA 408 0.3799 MRGSLIICVVLLCLDRKIDRRGQYNMGAKNHAIVMPDANVDATLNALVAAGFGAAGQRWMALSTVVFVEGSQSWYHTLFSIYISQISLLVAQAKERIHKLVQSGVESGAKLLLDGRNIVVAFISSTAFFKHCGCI. 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03199 135 SUPERFAMILY ALDH-like 24 121 IPR016161 GO:0016491
Seca12g03199 135 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 19 122 IPR010061 GO:0004491
Seca12g03199 135 Pfam Aldehyde dehydrogenase family 23 116 IPR015590 GO:0016491
Seca12g03199 135 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 27 131 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03199 Seca-Chr12 65187131 65187985 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g03199 20 120 Aldehyde Dehydrogenase Gene Family AT2G14170 59.292 1.27e-26 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03199 K00140 - twl:119982350 133.265