Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03183 ATGGAAGTCACCACCAACACTTTGTTCTGTTTGTTTGCTTCTTTTCTCTTCATTGTTCTGTTCAAATCACTCATCAAATCCTTCTCCTTCACCTCCAAAAGGAGACAATTGCCACTCCCTCCTGGTTCCATGGGTTGGCCTTACATAGGTGAAACCTTTCAAATGTATTCTCAAGACCCAAATGTCTTCTTTGCCAACAAAATCAAGAGGTTTGGCTCTATGTTCAAGTCCCATATTTTGGGTTGTCCTTGTGTGATGATTTCTAGCCCAGAAGCAGCTAAATTTGTGTTGAACAAAGCTCAACTCTTCAAACCAACATTTCCTGCTAGCAAAGAAAGGATGTTGGGGAAGCAAGCAATTTTCTTTCACCAAGGAGTATACCATGCTAACCTAAGGAGGCTTGTCCTTCGTACCTTTATGCCTCAAGCCATACAAAACATTGTCCCTGACATTGAATCCATTGCCCTAAGTTGCCTCAAATCATGGGAAGGAAAATTGATCACCACTTTCCTTGAAATGAAAAATTTCACCTTCAATGTTGCCCTGCTTTCAATTTTTGGGAAAGATGAAATTCTATACAGAGAGGACCTAAAACGATGCTACTACACACTTGAGAAAGGGTACAACTCAATGCCCATAAACCTTCCAGGGACACTGTTCCACAAGGCTATGAAGGCAAGGAAAGAGCTTGCTCAGATCTTGGCACAAATCATCTCAAAAAGGAGGAATATGAAGCAAGAGTACAATGACTTGTTGGGTTCTTTCATGGGTGAGAAAGCAGGTCTCACTGATGAACAGATAGCAGATAACATAATTGGTGTCATTTTTGCTGCTCGTGACACCACTGCTAGTGTACTTACGTGGATTGTCAAGTACCTTGGTGAAAACCCAAGTGTCCTAGAAGCAGTTACAGAAGAGCAAGAGTCTATACTAAAGAGCAAACAAGAAAGTGGTGAAGAAATGGGTCTAACTTGGGCAGACACAAAAAATATGCCATTAACATCAAGGGTCATACAAGAGACTCTAAGAGTTGCATCAATTTTGTCTTTTACTTTCAGAGAAGCCATAGATGATGTTGAATATCAAGGGTATCTTATACCAAAAGGGTGGAAAGTATTACCACTTTTTAGAAATATACACCACAGTCCAGATAACTTCAAAGAGCCAGAGAAATTTGATCCTTCAAGATTTGAGGTTGCACCAAAACCCAATACCTTCATGCCATTTGGCAATGGGACCCATGCATGTCCTGGCAATGAATTAGCCAAGTTGGAGATTTTGGTGCTTGTACATCATCTGACCACAAAGTACAGGTTGGTAAAGTTGATTATTATTATTGTTATCAATTATCATTGCAAGCCTTTTTCAGTGGAGACATATTCCAAAATTATATATCATATGTTTTTAGAATGA 1413 0.3963 MEVTTNTLFCLFASFLFIVLFKSLIKSFSFTSKRRQLPLPPGSMGWPYIGETFQMYSQDPNVFFANKIKRFGSMFKSHILGCPCVMISSPEAAKFVLNKAQLFKPTFPASKERMLGKQAIFFHQGVYHANLRRLVLRTFMPQAIQNIVPDIESIALSCLKSWEGKLITTFLEMKNFTFNVALLSIFGKDEILYREDLKRCYYTLEKGYNSMPINLPGTLFHKAMKARKELAQILAQIISKRRNMKQEYNDLLGSFMGEKAGLTDEQIADNIIGVIFAARDTTASVLTWIVKYLGENPSVLEAVTEEQESILKSKQESGEEMGLTWADTKNMPLTSRVIQETLRVASILSFTFREAIDDVEYQGYLIPKGWKVLPLFRNIHHSPDNFKEPEKFDPSRFEVAPKPNTFMPFGNGTHACPGNELAKLEILVLVHHLTTKYRLVKLIIIIVINYHCKPFSVETYSKIIYHMFLE. 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03183 470 PANTHER CYTOCHROME P450 26 35 440 - -
Seca12g03183 470 Pfam Cytochrome P450 40 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g03183 470 PRINTS P450 superfamily signature 407 416 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g03183 470 PRINTS P450 superfamily signature 336 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g03183 470 PRINTS P450 superfamily signature 416 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g03183 470 PRINTS P450 superfamily signature 277 294 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g03183 470 FunFam Abscisic acid 8 29 464 - -
Seca12g03183 470 CDD CYP90-like 68 438 - -
Seca12g03183 470 Gene3D Cytochrome P450 29 451 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g03183 470 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 409 418 IPR017972 GO:0005506|GO:0016705
Seca12g03183 470 SUPERFAMILY Cytochrome P450 33 439 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g03183 470 PRINTS E-class P450 group I signature 406 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g03183 470 PRINTS E-class P450 group I signature 266 283 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g03183 470 PRINTS E-class P450 group I signature 375 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g03183 470 PRINTS E-class P450 group I signature 286 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g03183 470 PRINTS E-class P450 group I signature 335 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g03183 470 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g03183 470 PRINTS E-class P450 group I signature 416 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g03183 470 Coils Coil 227 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03183 Seca-Chr12 63873787 63876837 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g03183 11 443 Cytochrome P450 AT4G19230 76.728 0.0 701
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03183 K09843 - gmx:100170674 780.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g03183 12 63873787 63876837 Seca12g03183 12 63873787 63876837 ECH