Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03168 ATGGTCTTTGGCAAAGCCTCCAGCGGCAAGAGCAACCTTCGAATCTCCTCCTCCCTTCAGGATCTCTCCTCCTACAGCCACCTCGATCCCGAAGATGCCGCCGCCGTCGCCGCCGCCGCGCCCGATTTAAAGAAACCGCACCATTACCTTCTCCAGAGGGAAAGCCTCGGGTCCAGTTTCTCCAAAACAAAACCGGTTCAAGCCGGAAGCCCGGTTCGCAAGAAATGGACCAAGCCGATCGCACTGTTTTTCTGCCTCGTAGTGTTAGTTTTTCTGATCTACACGATTTTCACACTCGTTTATTCTCACCAAGGGTCTGGTAAGTATTACGTTGTGCTTGATTGTGGGAGCACCGGTACTCGGGTTTATGTTTACAAGGCTGAGATTGAACACAAGGAGGATAGTTATCTTCCTATAGCTATTACTTCGTTGAGAACTGGTTTGCAGAAAAAGCCCGGTTCACAGAGTGGTCGGGCCTATGATCGAATGGAAACTGAGCCCGGGCTTGATAAGTTGGTGCATAATGTATCTGGTTTGAAGGCTGCACTTAAACCGCTTGTTAAATGGGCTCAGAAGCAGATACCTGAATCTTCTCATAAGAGCACTTCTTTGTTTCTTTATGCCACTGCTGGTGTTCGGAGGCTTCCCGTTGCTGACTCTAAATGGTTGTTAGATAATGCTTTTAATGTGTTAAAAGGTTCTCCTTTTATGTGTAGGAAGGATTGGGTTAAGATCATTACTGGGACAGAAGAAGCTTACTTTGGATGGATTGCACTTAACTATCACAGTGGAATATTGGGTGTTAAACCGAGGAAAGAAACATATGGGGCACTTGATTTGGGTGGTTCTTCGTTGCAGGTCACTTTTGAGGGTGATCAACAGGTGAATAGTGAGACTAGTTTGTATGTTAGGATTGGATCAGTGAATCATCATCTCACTGCTTATTCACTTGCCGGTTATGGTCTCAATGAGGCATTTGATAAATCCGTGGGGTATCTTTTTAAGAAGGGGGTTGGTGGGAAGAATGTGGAAGTTAAACATCCTTGCTTGCAATCTGGGTACAAGGATCAATATACATGCTCTCGTTGTTCTTCTGGTGAGAAAGAAGGTGAGAGTCCTAGAGTTAATGGGAAGGTTTTGGATGGAAAAGGAGAGCCAAGGACAAAGGTGACACTTGTTGGTGCTCCTAATTGGCAAGAATGTAGTACACTTGCAAAGGTTGCTGTGAATTTGTCTGAATGGTCTGATCTGGGTCGAGGGCTTGATTGTGAGGTTCATCCTTGTGCTCTGCGCGAGAATCTTCCTCGCCCTTTAGGCCACTTTTATGTGATTTCTGGATTTTTTGTGGTGTATCGGTTTTTCAACCTAACTGCTGAAGCCACACTTGATGATGTGTTGGAAAAGGGTAGGGAATTTTGTGAAAAGAATTGGAAAGTTGCAAAGAACAGTGTTGCTCCTCAGCCCTTTATTGAGCAATACTGCTTCAGGGCACCATATGTTGCGTCATTGCTGAGAGAGGGTTTGCATATTACTGACAAACATATAACTGTTGGCTCTGGAAGTATCACTTGGACACTTGGGGTAGCCTTGTTGGAAGCTGGGAAGGCTTATTCAGCTAGATTTGGGATTCATGGTTTTGACTTGCTTCAGATGAAGATGAATCCTCTGGTTCTTATTGCCATTTTGTTACTTTCTTTCATTCTTCTACTTTGTGCTATATCATGTGTTGTCAAGTGGGTGCCAAGATTTTTCCGGAGGCAATATCTTCCCCTTTTCAGGCATAACACTGTGTCAAGTGCATCTGTTCTTAATATCCCATCTCCTTTCCGGTTCCGGAGTTGGAGTCCAATCATTTCTGGGGATGCAAGAATAAAGACACCACTGAGCCCAACAATTGCAGGTTCACAAGATAGACCATTTAGCCTGGGGCATGGTCTTGGTGATAACAGTGGCGGCATCCAGCTGATGGAATCTTCCTTTTACCCATCAACTAGTAGTGTCTCACATAGTTATTCCTCAAACAATTTAGGGCAGATGCAATTTGAGAGCAGTAATATAGGGACCTTCTGGTCACCCCATAGAAGTCAAATGCGTCTGCAGAGTAGGAGATCACAATCTCGAGAAGACCTGAACTCCTCGATGGCTGAGGCACACATGGTGAAGGTTTAG 2169 0.45 MVFGKASSGKSNLRISSSLQDLSSYSHLDPEDAAAVAAAAPDLKKPHHYLLQRESLGSSFSKTKPVQAGSPVRKKWTKPIALFFCLVVLVFLIYTIFTLVYSHQGSGKYYVVLDCGSTGTRVYVYKAEIEHKEDSYLPIAITSLRTGLQKKPGSQSGRAYDRMETEPGLDKLVHNVSGLKAALKPLVKWAQKQIPESSHKSTSLFLYATAGVRRLPVADSKWLLDNAFNVLKGSPFMCRKDWVKIITGTEEAYFGWIALNYHSGILGVKPRKETYGALDLGGSSLQVTFEGDQQVNSETSLYVRIGSVNHHLTAYSLAGYGLNEAFDKSVGYLFKKGVGGKNVEVKHPCLQSGYKDQYTCSRCSSGEKEGESPRVNGKVLDGKGEPRTKVTLVGAPNWQECSTLAKVAVNLSEWSDLGRGLDCEVHPCALRENLPRPLGHFYVISGFFVVYRFFNLTAEATLDDVLEKGREFCEKNWKVAKNSVAPQPFIEQYCFRAPYVASLLREGLHITDKHITVGSGSITWTLGVALLEAGKAYSARFGIHGFDLLQMKMNPLVLIAILLLSFILLLCAISCVVKWVPRFFRRQYLPLFRHNTVSSASVLNIPSPFRFRSWSPIISGDARIKTPLSPTIAGSQDRPFSLGHGLGDNSGGIQLMESSFYPSTSSVSHSYSSNNLGQMQFESSNIGTFWSPHRSQMRLQSRRSQSREDLNSSMAEAHMVKV. 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03168 722 Gene3D - 100 247 - -
Seca12g03168 722 Pfam GDA1/CD39 (nucleoside phosphatase) family 105 531 IPR000407 GO:0016787
Seca12g03168 722 Gene3D Exopolyphosphatase. Domain 2 248 519 - -
Seca12g03168 722 MobiDBLite consensus disorder prediction 695 722 - -
Seca12g03168 722 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 80 538 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03168 Seca-Chr12 63156542 63161834 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g03168 10 722 Nodulin-like Gene Family AT4G19180 58.060 0.0 810
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03168 - - lja:Lj0g3v0174799.1 1082.78