Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03159 ATGTCTTCTTTCAGTCTTGCTATGAGCAGTACCTTGGTTTATCTTTTTCTTTATGTGCTTGTTGCTAAAGTTAGCTTTTGCTTTTCTGCTAAGGTTTATGTAGTGTACATGGGAAGCAAAACTGGCGAATACCCAGATGATATTCTGAAGGAAAATCATCAAATTCTTGCTTCTGTTCACAGTGGAAGCATTGAGCAAGCCCAAGCTTCTCATATTTATAGCTACAAACATGCTTTCAGAGGCTTTGCAGCAAAGCTCACTGAAGAACAGGCTTCTCAAATTTCTAAAATGGCAGGAGTGGTTTCTGTTTTTCCCAATTCTAAAAGAAAGCTGCACACAACTCATTCATGGGATTTCATGGGACTTCTGGATGACCAAACCATGGAGACTCTTGGTTACTCCATCAAAAACCAAGAAAATATCATCATTGGTTTTATTGATACGGGAATTTGGCCGGAATCCCCAAGCTTCAGTGACACCGACATGCCTGCAGTGCCACCTGGGTGGAAGGGTCAATGTCAATCAGGGGAAGCATTCAATGCCTCATCTTGCAACAGGAAAGTGATTGGAGCTAGATACTATATGAGTGGATATGAAGCAGAGGAAGAGTCAGATGCAACAGTTTCATTCAGATCTCCAAGGGATAGCACTGGTCATGGGAGCCATACAGCTTCTATAGCTGCAGGGCGCTACGTGGCCAACATGAATTATATGGGACTGGCAGCTGGAGGAGCCAGGGGAGGTGCACCTATGGCTAGAATTGCTGTGTACAAAACATGTTGGGATTCTGGTTGCTATGATGTGGACTTGCTAGCTGCCTTTGATGATGCCATAAGAGATGGGGTTCACATTTTGTCTCTATCTCTGGGTGCTCAATCTCCCCAAGGAGACTATTTTAGTGATGCCATATCTGTGGGGTCATTTCATGCTGCTAGTCGTGGAGTGCTGGTTGTTGCATCAGCTGGAAATGAAGGACACCCTGGTTCTGCTACCAACCTTGCACCATGGATACTCACTGTTGCTGCCAGCTCAACAGATAGGGATTTCACTTCTGATATCATATTAGGAAATGGTGTTAAAATCACGGGTGAAAGTCTGAGTCTCTCTGAAATGAATGCCTCCACAAGGATAATTCCTGCTTCTGAAGCCTTTGCAGGATACTTTACTCCTTATCAATCCAGTTACTGTTTAGAGAGTTCTTTGAATAAAACCAAGACCACAGGGAAGGTTCTAGTGTGTCGCCATGTAGAGAGTTCAACAGAGTCAAAGGTGGCAAAGAGTAAGGTAGTGAAAGAGGCAGGTGGTGTTGGCATGATACTTATTGATGAGACAGATCAAGATGTTGCCATCCCATTTGTGATCCCTTCAGCTATTGTTGGAAAGAAAACAGGAGAACAGATTCTATCCTATCTCAAGACTACACGTGAGCCTATGTCAAGGATATTCAGAGCAAAGACAGTACTAGGAGCTCGCCTTGCACCCCGTGTAGCAGCATTTTCTTCTAAAGGCCCCAATGCTTTAAACCCAGAAATTTTGAAGCCTGATATCACAGCTCCAGGACTAAATATCCTTGCAGCATGGTCTCCAGCAGCTGGAAACATGTTCAACATTCTCTCAGGAACTTCTATGGCTTGTCCTCATGTAACTGGGATTGCAACCTTAGTCAAAGCTGTCCATCCTTCATGGTCTCCATCTGCTATCAAATCTGCCATCATGACAACTGGTAATACAAACTAA 1737 0.4381 MSSFSLAMSSTLVYLFLYVLVAKVSFCFSAKVYVVYMGSKTGEYPDDILKENHQILASVHSGSIEQAQASHIYSYKHAFRGFAAKLTEEQASQISKMAGVVSVFPNSKRKLHTTHSWDFMGLLDDQTMETLGYSIKNQENIIIGFIDTGIWPESPSFSDTDMPAVPPGWKGQCQSGEAFNASSCNRKVIGARYYMSGYEAEEESDATVSFRSPRDSTGHGSHTASIAAGRYVANMNYMGLAAGGARGGAPMARIAVYKTCWDSGCYDVDLLAAFDDAIRDGVHILSLSLGAQSPQGDYFSDAISVGSFHAASRGVLVVASAGNEGHPGSATNLAPWILTVAASSTDRDFTSDIILGNGVKITGESLSLSEMNASTRIIPASEAFAGYFTPYQSSYCLESSLNKTKTTGKVLVCRHVESSTESKVAKSKVVKEAGGVGMILIDETDQDVAIPFVIPSAIVGKKTGEQILSYLKTTREPMSRIFRAKTVLGARLAPRVAAFSSKGPNALNPEILKPDITAPGLNILAAWSPAAGNMFNILSGTSMACPHVTGIATLVKAVHPSWSPSAIKSAIMTTGNTN. 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03159 578 SUPERFAMILY Subtilisin-like 111 575 IPR036852 GO:0004252|GO:0006508
Seca12g03159 578 Pfam Peptidase inhibitor I9 32 112 IPR010259 -
Seca12g03159 578 Pfam Subtilase family 139 575 IPR000209 GO:0006508|GO:0008236
Seca12g03159 578 ProSiteProfiles Serine proteases, subtilase domain profile. 116 578 - -
Seca12g03159 578 PRINTS Subtilisin serine protease family (S8) signature 138 157 IPR015500 -
Seca12g03159 578 PRINTS Subtilisin serine protease family (S8) signature 539 555 IPR015500 -
Seca12g03159 578 PRINTS Subtilisin serine protease family (S8) signature 215 228 IPR015500 -
Seca12g03159 578 FunFam subtilisin-like protease SBT1.5 346 488 - -
Seca12g03159 578 FunFam Subtilisin-like protease SBT1.5 140 355 - -
Seca12g03159 578 ProSitePatterns Serine proteases, subtilase family, serine active site. 540 550 IPR023828 -
Seca12g03159 578 FunFam Subtilisin-like protease SBT5.3 22 112 - -
Seca12g03159 578 CDD Peptidases_S8_3 110 574 IPR034197 -
Seca12g03159 578 CDD PA_subtilisin_like 352 481 - -
Seca12g03159 578 Pfam PA domain 384 467 IPR003137 -
Seca12g03159 578 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 28 112 IPR037045 -
Seca12g03159 578 Gene3D Peptidase S8/S53 domain 140 577 IPR036852 GO:0004252|GO:0006508
Seca12g03159 578 Gene3D - 346 488 - -
Seca12g03159 578 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 33 576 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03159 Seca-Chr12 63041224 63045403 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g03159 31 574 Subtilisin-like Serine Gene Family AT5G45650 44.351 1.78e-154 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03159 - - gmx:100819201 999.579