Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03118 ATGTATGAGAAACATCCCCAGTTAAACGGAGCCTACTACGGCCCCGCCATCCCGCCACCTAAAACCTCCCACCGCTCAGGACGTGTTAGCGGCTGCGGTTGCTGCTGCGGTTGCCTCTTCAGCCTCATCTTCAAACTCATCCTCACCGTCGTCATCATCGTAGGCATCGTTGTGTTCCTCTTCTGGCTCATCGTCCGCCCCAACGTCGTCAAGGTTCACGTAACCGATGCATCCCTCACCCAATTCAACTACGCCAACAACAGCCTCCAATACAACCTTGCTCTCAACTTCACCGTCCGCAACCCCAACAAGATGCTCGTCATCTATTACGACCACATCGAAGCCAGGGCATTGTACCAGGACGCCAGGTTCGACTCCGAATTCATGGACCCTTTCTATCAGGGCCACAATAACACTACCTTTTTGACCACTGAGTTTAAGGGTCAACACGTCATGACGCTTGACGCTGACCAGTCTTCCGAACTCAGCAAGGAGAAGGGCTCAGGGGTTTACGGGATCGATGTGAAGCTTTATCTGAGGGTGAGGTTCAGGTTGGGAGCCCTCAAGACGAAGACGTTGAAGCCCAAAGTGGTCGGAGAGGACATGGCGGAGGGAAAGCATCGTCTGGTTTTGGAGAGGACATGGCAGGGTTTTTCATTTTATACATTTTATAAAATTATTTTGCATGTATCAACTAGTAATTCAAGCATTTATTTTGCATCTCATTAA 729 0.5007 MYEKHPQLNGAYYGPAIPPPKTSHRSGRVSGCGCCCGCLFSLIFKLILTVVIIVGIVVFLFWLIVRPNVVKVHVTDASLTQFNYANNSLQYNLALNFTVRNPNKMLVIYYDHIEARALYQDARFDSEFMDPFYQGHNNTTFLTTEFKGQHVMTLDADQSSELSKEKGSGVYGIDVKLYLRVRFRLGALKTKTLKPKVVGEDMAEGKHRLVLERTWQGFSFYTFYKIILHVSTSNSSIYFASH. 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03118 242 Pfam Late embryogenesis abundant protein 97 197 IPR004864 -
Seca12g03118 242 PANTHER OS05G0367900 PROTEIN 32 192 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03118 Seca-Chr12 61241921 61242649 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g03118 64 197 SNARE and Associated Proteins AT1G32270 39.259 4.22e-22 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03118 - - gmx:100793187 262.307