Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03100 ATGGAATCTAGAGTAATAGTCCTTCACATATACCCTAGTGTTGGTCTAGATATACTTCACGTGGCTCAGTCACTTGGCATGATGGGAAGTGGTTATGTATGGATAGCCACTGATTGGCTTTCTACAGTTCTAGATTCATACCCTTCCTTGACCACATCTCAAGCCATGAATGATATCCAAGGTGTTATCACCTTGCGGATGAACACCCCAGAATCAGAAATCAAGAAAAAATTTACTTCTAGGTGGAGCAACCTTAGCCATGAAAAGGATTTTGGGTTGAACATCTTTGGTCTATATGCCTATGACACGGTTTGGGTTCTTGCTTCTGCACTAGATGCATTTTTAACAGTGGTGGAACTTTGTCATTTTCAAATGATTCAAGTCTAA 387 0.4031 MESRVIVLHIYPSVGLDILHVAQSLGMMGSGYVWIATDWLSTVLDSYPSLTTSQAMNDIQGVITLRMNTPESEIKKKFTSRWSNLSHEKDFGLNIFGLYAYDTVWVLASALDAFLTVVELCHFQMIQV. 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03100 128 PANTHER OS06G0188250 PROTEIN 1 113 - -
Seca12g03100 128 Pfam Receptor family ligand binding region 2 115 IPR001828 -
Seca12g03100 128 Gene3D - 2 92 - -
Seca12g03100 128 Gene3D - 67 115 - -
Seca12g03100 128 SUPERFAMILY Periplasmic binding protein-like I 3 114 IPR028082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03100 Seca-Chr12 60649291 60649677 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g03100 1 116 Ion Channels AT2G32390 53.333 8.52e-37 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03100 K05387 - gmx:100790502 188.734