Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03097 ATGATTCTGAAACCAAGTGTTCCTGCGGGCTTTGATTTTGAAACCAAAGTAGTGTCCAAAGACATTGTCATCATACCAGAAACTGGTGTCACAGCCAGGCTATATAGTCCCAAAAATGTGAAGCTTCCTTTAGTTCTCTACTTCCATGGTGGGGCATATTACATCTCTTCTCCCTCCGATCCCCTCTACCATAACTCCCTAAACAAATTCGTAGCTGAGGCTAATGTTGTTGTTTTAGTTAATTATCGGTTAGCACCAGAGCATCCACTTCCAACTGCATATCATGATGCTTGGGCTGCGGTTCAATGGGTTGCTTCTCATGCTTCCCAAGATGGTTTGAGGACTGAAACAAAATTTTAA 360 0.425 MILKPSVPAGFDFETKVVSKDIVIIPETGVTARLYSPKNVKLPLVLYFHGGAYYISSPSDPLYHNSLNKFVAEANVVVLVNYRLAPEHPLPTAYHDAWAAVQWVASHASQDGLRTETKF. 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03097 119 Pfam alpha/beta hydrolase fold 45 113 IPR013094 GO:0016787
Seca12g03097 119 SUPERFAMILY alpha/beta-Hydrolases 11 112 IPR029058 -
Seca12g03097 119 Gene3D alpha/beta hydrolase 1 118 IPR029058 -
Seca12g03097 119 PANTHER ARYLACETAMIDE DEACETYLASE 15 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03097 Seca-Chr12 60593619 60593978 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g03097 1 112 Carbohydrate Esterase AT1G49660 44.167 7.40e-29 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03097 - - var:108341277 165.236