Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03091 ATGGGAGGCTTTTTGCATACTTTTGAGTTTGATCAGGGGAGCATGGCCAAGAAAGTTCATGCTCATAAGAGACAAAATGCCGGCCTGAAAAGTCCTCGAAATAACATGGAGCTGCAAGTTGAAACATCTCAGATCCACTATCCAGAAAGAGAATTACCATACTCTTGCCAAGAAGAAGATAGCTGGTCAAAGAATAATAGTTACTCAAATGCGGCTTCAGTGAAAAAATTGAACAATGAGGAGCAATCCAAACAATCAGGCACCAGAAATAATGCACCAAGCCTTGTGGCAAGATTGATGGGGGTAGACATGATGCCATTAGACACTAAATCTGTTGTTCCACTTCCATCAGATGAAAGCATAAGTGAAAATATGGAAAGGAAGTTTTCAAAGAAAGGAATGAACAAAAGGGTTCCAGTTAGTAAGGGTTCCTCCAACTTTCATTCTTATAGCCAGATGGAACTTGATTCATTTTATCAAGACTTTGATGATGATGGATGGGGACAGAATTTTGGAAAACCAAGGCCAAGGGAACATCCTCAGGAAGAGGAACTCCAGAAATTCAAGAAAGAATTTGAGGCATATCAAGCAGCAAGAATTAAGGAGTGTTCAAAGGTTGTTCAAATTGGAAGTGTTTCTATGCGAATTCTTGCTCAAGAGAACCTGAACAAGGAAAAGGTACCACATATTCCAAATTCTCAGAGAGAAGCAACAGAGAAATCTGCAGAACTTGATAGCCACTCATTTACAACTAAGCTACCAAATGATGATATTGTGGAGTCAATCTCAACTAAGAAAAAAGAATCCTTTCCTTCAAGGAATAAAACACTAAGTAGAGGCTGTGAGGAGTCTCTAATGATGAAATCTAGAAGCATAATAGATATATGTTCTTCTCCCACTCAGATAGTTATCTTGAAGCCTGGTCCTGATAGGATTTGCAATGGCAATCATGAAGATAATTGGATCAGTTCATCAAGCACTTTACATGGGAGAGATAGTATAGAAAATTTTCTTGAGGAGGTGAGAGAGCGGTTGAACTGTGAACTTCAAGGGAAAACTGTCATAAAGGGTTCTGTGTGTAGAGGAAATGGAATTGATACAGCTTACAATGAAAAACCATTTGATCCTAAAGAAATAGCTCATCATATAGCAAAAGAGGTAAGAGAAAGTGTGACCAGAGATGCTGAAGCAAATTTACTCAGCTCAGAATCAACAAGATCAAAAAACCAACAGCAAAAGCCTTTTCCCACTAGGTGGGGTAGGCTACCAGAATTTTTCAACAGAGATACCAGGAAATTCTTGTCAGAGAGGCTAAGAAATGTTCTGAAAAGTGAAGCACATTGTGACATTCCTGAAATGACTTGTGGGAGCTCAAGGTCATATATATTAGAAAATAAGAGAGATAGATTAAAGCAAGTAGAGGATGATAAAAAGTGTACAAGTGACATAAGCCAGTGGAGAATTTTGAAAGAGAAAGAAAATATACAAACAGGTTCCTTCAGGCATGGACTAGATGACAATTTATTGCTCCACAAGGATTTGTCCCCTAGTAACCTTGTAAGATCCTTGTCTGCTCCTGTATCAGGAACATCATTTGAGAAGCTTCTTCTAGAGGACCGCCACATCTTAACGGGTGCCCTTATTAGGAGGAAGCTTGAAGCAGTTGAAACAATCCATGTTGATGTTAAAAAACAGAAGAAAGATAGATTTAATATTAAAGAAAAAGTTTCCCATTTTAAATATACTTTTGGTCTAAGAAGAAAGTTATTTGGTAAGACAGTTCAGTCAATGATAGAAGCACGTGGCAATGAAGTAAGAGATATCAGAAGTGGACCAACTGTTCTCATGAAATATGGTGAGAGGCATGAGAACTACACTGAGGTACCTCCTAGTCCTGCATCTGTGTGCAGCTGTACTCAGGAAGAGCTTTGGAGACTGATTGAATATTTAAATCCAATATCAAATCCAGATGTATCTTCAGTAGACAATATTGGTATGTCTGAGGATTTTAGAGATATTGGTTCTGGTTTGAATGAGAAAAGGATGCAACTCAGTCGACTTGAGTCTGATGGCCCTGAGGACTATACAACAAAGCAGGATCCTTTTGAGTCTGAATTAGTTCAATTGGAGGATCCAGCAGAATCTTACATAAGAGATCTGCTTGTTGCTTCTGGTCTGTACTTTGGTTCATGGGATAAATGTTTAACAAGATGGGACTCATTTGCAAAGCCTATTGGTAACTCAGTTTTTGAAGAAGTGGAAGAATCTCATAAGAAATTGGTCAAGGAGAATGAAAGATCTAAAAAGGATCAAAATGAGAGTAAGTTAGAGCACAAGGTTTTACTTGATTTATTAAATGAAGCACTTTCCATTGTTCTTGGACCACCTTTGACATTGCCTAGATTCAGAAGGAAACTAAGCAATTCCTCCATTCAGCCTCCACCATGTGGAAGGGAACTACTAAAGTTAGTATGGGACATTATTTGTGTTTCTCTATATCCTTCATCTAACACATCTCCTTATTCACTTGATCGTTGGGTGGCACATGATTTGAGATCCATCTCCTGGCCTGGACTAATGAATGATCAAATCAATATAATGGAAAGGGAGATCGCATGTCTAATCACTGATGATTTGGTTGAAGAATTCATAAAGAATATGCTCTTAGGTGTAGTGTAA 2679 0.3826 MGGFLHTFEFDQGSMAKKVHAHKRQNAGLKSPRNNMELQVETSQIHYPERELPYSCQEEDSWSKNNSYSNAASVKKLNNEEQSKQSGTRNNAPSLVARLMGVDMMPLDTKSVVPLPSDESISENMERKFSKKGMNKRVPVSKGSSNFHSYSQMELDSFYQDFDDDGWGQNFGKPRPREHPQEEELQKFKKEFEAYQAARIKECSKVVQIGSVSMRILAQENLNKEKVPHIPNSQREATEKSAELDSHSFTTKLPNDDIVESISTKKKESFPSRNKTLSRGCEESLMMKSRSIIDICSSPTQIVILKPGPDRICNGNHEDNWISSSSTLHGRDSIENFLEEVRERLNCELQGKTVIKGSVCRGNGIDTAYNEKPFDPKEIAHHIAKEVRESVTRDAEANLLSSESTRSKNQQQKPFPTRWGRLPEFFNRDTRKFLSERLRNVLKSEAHCDIPEMTCGSSRSYILENKRDRLKQVEDDKKCTSDISQWRILKEKENIQTGSFRHGLDDNLLLHKDLSPSNLVRSLSAPVSGTSFEKLLLEDRHILTGALIRRKLEAVETIHVDVKKQKKDRFNIKEKVSHFKYTFGLRRKLFGKTVQSMIEARGNEVRDIRSGPTVLMKYGERHENYTEVPPSPASVCSCTQEELWRLIEYLNPISNPDVSSVDNIGMSEDFRDIGSGLNEKRMQLSRLESDGPEDYTTKQDPFESELVQLEDPAESYIRDLLVASGLYFGSWDKCLTRWDSFAKPIGNSVFEEVEESHKKLVKENERSKKDQNESKLEHKVLLDLLNEALSIVLGPPLTLPRFRRKLSNSSIQPPPCGRELLKLVWDIICVSLYPSSNTSPYSLDRWVAHDLRSISWPGLMNDQINIMEREIACLITDDLVEEFIKNMLLGVV. 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03091 892 MobiDBLite consensus disorder prediction 229 252 - -
Seca12g03091 892 MobiDBLite consensus disorder prediction 395 416 - -
Seca12g03091 892 Pfam DUF761-associated sequence motif 91 106 IPR032795 -
Seca12g03091 892 MobiDBLite consensus disorder prediction 229 246 - -
Seca12g03091 892 Pfam Domain of unknown function (DUF4378) 715 882 IPR025486 -
Seca12g03091 892 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 888 - -
Seca12g03091 892 MobiDBLite consensus disorder prediction 394 420 - -
Seca12g03091 892 Coils Coil 750 770 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03091 Seca-Chr12 60422658 60428754 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g03091 74 887 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 35.943 3.25e-126 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03091 - - gmx:100810825 1132.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g03091 12 60422658 60428754 Seca12g03091 12 60422658 60428754 ECH