Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03079 ATGCTAGAGCAAATGGATTTTGTGTCCATAAAAACACAAAAAGAAAAAGCAAGAAAACAGAAGAGGTTTTGCAGCAAGAGTTTGTGTTACAAGGAAGGTGAGCGACGAAATAGGGGACCTACAATGGAAGAAAGAACAAAAGAGCCTAGAGCTGAGACTAAGAGTAGGTGTGGAGCAAAGTTTAGAGTGAATGTTGATAAAGTTTATGGTCGTTGGTATGCATCGTGCTTTGAATATGAGCATAGTCATGAGTTATTAGATCCTATATATTGTGCAATGTTAGCCTCTCATAGAGTCATGAGTGATAGTGACATAAGTCAAATGAATAGTATGTTGAATGTTGGTATTGGAGCATCACACATCTTTGGAGTGTTTACTAGCCAAAGTGGAGAGTATGGAAAAGTTGGATTCAAGAAGAAGGATATTCATAATCAAATTCTTCGGCAAAGAAAGTTGCAATCGTCTGATGTGGCTAAAGCAATACGGTTCTTATGTGAGTTCATGAAGGAAGATTCAATGATGTATTGTGAGCCAACAGTTGATAGTGAAGGTAGACTTGAGCACTTATTTTGGAGTGATGGCATTAGCCAACTTAATTACGAAATCTTGGTGAAGTGCTTGCATTTGATGCTACATATGCTTGAAATCAATTATCCCGAACCTGCAAATGTTTTTCACAATGGTATTGGTGTTATCCCTGACCTTGCTATTCCTCCTCCCTTAAATATGGCCGAGATGCATCATGTTTTTGTGGACAAGATTTTGATTGACAAGAATGTGTCTTCACACAATATGGTTAATATCATTAACTTCCCAATATATCTATTCTCATTGTTATTAAATTCTTTATTGATGTTTTATATTTGA 867 0.3633 MLEQMDFVSIKTQKEKARKQKRFCSKSLCYKEGERRNRGPTMEERTKEPRAETKSRCGAKFRVNVDKVYGRWYASCFEYEHSHELLDPIYCAMLASHRVMSDSDISQMNSMLNVGIGASHIFGVFTSQSGEYGKVGFKKKDIHNQILRQRKLQSSDVAKAIRFLCEFMKEDSMMYCEPTVDSEGRLEHLFWSDGISQLNYEILVKCLHLMLHMLEINYPEPANVFHNGIGVIPDLAIPPPLNMAEMHHVFVDKILIDKNVSSHNMVNIINFPIYLFSLLLNSLLMFYI. 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03079 288 PANTHER OS01G0519700 PROTEIN 12 213 - -
Seca12g03079 288 Pfam FAR1 DNA-binding domain 5 86 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03079 Seca-Chr12 60219714 60220580 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca12g03079 FAR1 1.1e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03079 - - tpra:123913749 182.57