LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca12g03073	ATGAGTGACATGGACTTTAATAATGATGATTCAGCTTTTAATCTGGATGATGATAGGGACATAAGTTATAGTGACTCTTCTAGCAGTCATGAAATGACTAGTGGGGCTGATATGGATGAGGAGAATGATGTTATTGATACTGATGTTAGAGACGGTGTGTCAAGGAGGATAATTGACTTGACAAATGATGATTTAAGGGCTTTGGAGTTCGCTAGTGAAGATCATGCGTTCAATTTTTACTTTTCTTTTGCAAAATGTAATGGATTTGCTATGAGGAAAGATGATGTTATTCGAGACAAAAAAGGGATGGTCATAATGCGGCAGTATTTATGTAGTAGGGCTGGTATGAGGGACAAAAAGCATTTGATTAGGTTAGATCGAAAAAAGGAACACAGACCCCTTACCCGTACCAATTGTCTAGCAAAGTTGAGAGTTAGGTTTGATTACAAGACGGGTAAATGGAAGGTTGTTTCATTTGAAGAATCTCACAACCATGATTTAACCCCTGCAAAGTTTGTACCTCTAATTCCTAATTATAGGGGATTGACTGATGGGGACAAAGCCCAAGTGGATGCATTACATTCTCATGGCATTAGGCCTTGCCAGATTATGGGTTTTCTTGTTGATAAAAAAGGAGGGTATAGAAATGTTGGATTTTCAAAGAAAGATTTGTACAACTACATAGATGAGGTTAAACGTGGTAAGATAAAAGATGGGGATGTTGTTGCTGGCTTAAGTTATTTGCAAGGAAAGGCGGATAATAATCCAATGTTTTTTTAA	780	0.3731	MSDMDFNNDDSAFNLDDDRDISYSDSSSSHEMTSGADMDEENDVIDTDVRDGVSRRIIDLTNDDLRALEFASEDHAFNFYFSFAKCNGFAMRKDDVIRDKKGMVIMRQYLCSRAGMRDKKHLIRLDRKKEHRPLTRTNCLAKLRVRFDYKTGKWKVVSFEESHNHDLTPAKFVPLIPNYRGLTDGDKAQVDALHSHGIRPCQIMGFLVDKKGGYRNVGFSKKDLYNYIDEVKRGKIKDGDVVAGLSYLQGKADNNPMFF.	260

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca12g03073	259	PANTHER	OS01G0519700 PROTEIN	68	258	-	-
	Seca12g03073	259	Pfam	FAR1 DNA-binding domain	78	168	IPR004330	-
	Seca12g03073	259	MobiDBLite	consensus disorder prediction	1	44	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca12g03073	Seca-Chr12	59827708	59828531	Dispersed/Proximal

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Seca12g03073		FAR1	1.5e-20	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca12g03073	-		-	ccaj:109794460	291.582