Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03070 ATGAGTGACATGGACTTTAATAATGATGATTCAGCTTTTAATCTGGATGATGATAGGGACATAAGTTATAGTGACTCTTCTAGCAGTCATGAAATGACTAGTGGGGCTGATATGGATGAGGAGAATGATGTTATTGATACTGATGTTAGAGACGGTGTGTCAAGGAGGATAATTGACTTGACAAATGATGATTTAAGGGCTTTGGAGTTCGCTAGTGAAGATCATGCGTTCAATTTTTACTTTTCTTTTGCAAAATGTAATGGATTTGCTATGAGGAAAGATGATGTTATTCGAGACAAAAAAGGGATGGTCATAATGCGGCAGTATTTATGTAGTAGGGCTGGTATGAGGGACAAAAAGCATTTGATTAGGTTAGATCGAAAAAAGGAACACAGACCCCTTACCCGTACCAATTGTCTAGCAAAGTTGAGAGTTAGGTTTGATTACAAGACGGGTAAATGGAAGGTTGTTTCATTTGAAGAATCTCACAACCATGATTTAACCCCTGCAAAGTTTGTACCTCTAATTCCTAATTATAGGGGATTGACTGATGGGGACAAAGCCCAAGTGGATGCATTACATTCTCATGGCATTAGGCCTTGCCAGATTATGGGTTTTCTTGTTGATAAAAAAGGAGGGTATAGAAATGTTGGATTTTCAAAGAAAGATTTGTACAACTACATAGATGAGGTTAAACGTGGTAAGATAAAAGATGGGGATGTTGTTGCTGGCTTAAGTTATTTGCAAGGAAAGGCGGATAATAATCCAATGTTTTTTTCAAGATTTTTATGTTCCGAGGATGGTAAACTTACTCATCTATTCTGGTGTGATGCAAATAGTCGTGTGGATTTTCAATTTTTTGGGGATGTTCTCGCATTTGATGCAACATACAAGAAGAACAGATATAAATATCCATTGGTGATATTTTCTGGGAAAAATCACCACTTTCAAACAGTAATATTTGGGTGTGCACTCATTGCTGATGAAACAATTGATACTTATAAGTGGGTGCTAAGGATGTTTTCGGAAGCAATGTTCAACAAGCATCCAGGAGCAATGGTGACTGATGGTGATGACAACCAGTCAGTGGACCTCTAA 1098 0.3761 MSDMDFNNDDSAFNLDDDRDISYSDSSSSHEMTSGADMDEENDVIDTDVRDGVSRRIIDLTNDDLRALEFASEDHAFNFYFSFAKCNGFAMRKDDVIRDKKGMVIMRQYLCSRAGMRDKKHLIRLDRKKEHRPLTRTNCLAKLRVRFDYKTGKWKVVSFEESHNHDLTPAKFVPLIPNYRGLTDGDKAQVDALHSHGIRPCQIMGFLVDKKGGYRNVGFSKKDLYNYIDEVKRGKIKDGDVVAGLSYLQGKADNNPMFFSRFLCSEDGKLTHLFWCDANSRVDFQFFGDVLAFDATYKKNRYKYPLVIFSGKNHHFQTVIFGCALIADETIDTYKWVLRMFSEAMFNKHPGAMVTDGDDNQSVDL. 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03070 365 Pfam MULE transposase domain 290 360 IPR018289 -
Seca12g03070 365 MobiDBLite consensus disorder prediction 1 44 - -
Seca12g03070 365 Pfam FAR1 DNA-binding domain 78 168 IPR004330 -
Seca12g03070 365 PANTHER OS01G0519700 PROTEIN 68 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03070 Seca-Chr12 59752647 59753788 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca12g03070 FAR1 3e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03070 - - ccaj:109794460 427.943