Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03067 ATGAGTGAGATGGACTTTAATAGTGATGATTCAGCTGTTAATCTGGATGATGATAGGGACATAAGTTATAGTGACTCTTCTAGCAGTCATGAAATGACTAGTGGGGCTGATATGGATGAGGAGAATGATGTTATTGATACTGATGTTAGAGACGGTGTGTCAAGGAGGATAATTGACTTGACAAAAGATGATTTAAGGGCTTTGGAGTTTGCTAGTGAAGATCATGCGTTCAATTTTTACTTTTCTTATGCAAAATGTAATGGATTTGCTATGAGGAAAGATGATGTTATTCGAGACAAAAAAGGGATGGTCATAATGCGGCAGTATTTATGTAGTAGGGCTGGTATGAGGGACAAAAAGCATTTGATTAGGTTAGATCGGAAAAAGGAACATAGACCCCTTACCCGTACCAATTGTCTAGCAAAGTTGAGAGTTAGGTTTGATTACAAGACGGGTAAATGGAAGGTTGTTTCATTTGAAGAATCTCACAACCATGATTTAACCCCTGCAAAGTTTGTACCTCTAATTCCTAATTATAGGGGATTGACTGATGGGGACAAAGCCCAAGTGGATGCATTACATTCTCATGGCATTAGGCCTTGCCAAATTATGGGTTTTCTTGTTGATCAAAAAGGAGGGTATAGAAATGTTGGATTTTCAAATAAAGATTTGTACAACTACATAGATGAGGTTAAACGTGGTAAGATAAAAGATGGGGATGTTGTTGCTGGCTTAAGTTATTTGCAAGGAAAGGCGGATAATAATCCAATGTTTTTTTAA 780 0.3731 MSEMDFNSDDSAVNLDDDRDISYSDSSSSHEMTSGADMDEENDVIDTDVRDGVSRRIIDLTKDDLRALEFASEDHAFNFYFSYAKCNGFAMRKDDVIRDKKGMVIMRQYLCSRAGMRDKKHLIRLDRKKEHRPLTRTNCLAKLRVRFDYKTGKWKVVSFEESHNHDLTPAKFVPLIPNYRGLTDGDKAQVDALHSHGIRPCQIMGFLVDQKGGYRNVGFSNKDLYNYIDEVKRGKIKDGDVVAGLSYLQGKADNNPMFF. 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03067 259 Pfam FAR1 DNA-binding domain 78 168 IPR004330 -
Seca12g03067 259 MobiDBLite consensus disorder prediction 1 43 - -
Seca12g03067 259 PANTHER OS01G0519700 PROTEIN 68 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03067 Seca-Chr12 59673866 59674689 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca12g03067 FAR1 3.6e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03067 - - ccaj:109794460 293.123