Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03032 ATGTGTTTTCAATTGCCACTGCAGGTATATGATTTGACTCAATATTTGGATGATCATCCTGGTGGAGATGATGTAATCATTGCTGCGACTGGGAGAGATGCAACAGATGATTTTGAAGATGCTTGTCACAGCAAAAGTGCAAGAGAACTTATGGAAATAAATTCAGATAGCACTATTAGTCTAAGTTTCATGTTCTATTTCCTGTCCAATCTGCAGGAGATTGGACAATCTGCATGGAGGCTGTGA 246 0.3943 MCFQLPLQVYDLTQYLDDHPGGDDVIIAATGRDATDDFEDACHSKSARELMEINSDSTISLSFMFYFLSNLQEIGQSAWRL. 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03032 81 PANTHER CYTOCHROME B5 8 52 - -
Seca12g03032 81 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 8 52 IPR036400 -
Seca12g03032 81 PRINTS Cytochrome B5 signature 34 41 IPR001199 -
Seca12g03032 81 PRINTS Cytochrome B5 signature 19 33 IPR001199 -
Seca12g03032 81 PRINTS Cytochrome B5 signature 9 19 IPR001199 -
Seca12g03032 81 SMART Cyt_b5_2 3 54 IPR001199 -
Seca12g03032 81 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 1 72 IPR001199 -
Seca12g03032 81 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 15 22 IPR018506 GO:0020037
Seca12g03032 81 Gene3D - 5 58 IPR036400 -
Seca12g03032 81 Pfam Cytochrome b5-like Heme/Steroid binding domain 8 51 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03032 Seca-Chr12 58505822 58506188 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g03032 7 52 NADPH P450 reductases AT2G32720 67.391 2.52e-20 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03032 K23490 - csv:101220127 85.5001