Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03028 ATGATGCTTTGGTCTTTCTTAGGCAAGATACACGGAGGTTTCTCAGTATTCTTTACACACAGGAAATTAGAAGCACTCATCAGCAGCTTGAATGAAGATAGGGGAATGGAGGTGCCTACAGGTGATGTAATGGAAGGACATTTTGTAGTTTTTGCTAACAAGGATCAACTAACCAAACGGTTTGTTGTTGATTTGCACTATTTGCGTGACCCTGCTTTTCTGGGACTGCTGGAACGGGCAAAAGAAGAGTATGGCTTCAAACAGAAAGGGCCTTTGGTAATTCCATGCCATCCTCAAGAACTAGAGAACATTCTAGCTAGAAGGACAACATAG 333 0.4234 MMLWSFLGKIHGGFSVFFTHRKLEALISSLNEDRGMEVPTGDVMEGHFVVFANKDQLTKRFVVDLHYLRDPAFLGLLERAKEEYGFKQKGPLVIPCHPQELENILARRTT. 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03028 110 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 31 104 IPR003676 GO:0009733
Seca12g03028 110 Pfam Auxin responsive protein 38 106 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03028 Seca-Chr12 58499457 58499789 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g03028 24 106 Calmodulin-binding Proteins AT4G34750 40.964 1.66e-12 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03028 - K14488 gmx:100809715 143.665