Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02995 ATGTTGCCATCATCAAATAGCAAGGGGGAATGCAACTGCAGCGGCAACAACAAAGGTTCCTCTTCCGATCAGTCTTCTAAGCCTGATCGTTCCTCTTCTTCTTCTTTTTCTTCAACAACAACAAGACTATCATTATCCCCTTCTTCATCTTCAACCCCCAACGTTTTGCAAATTCCAAAAAGCAACAAAACCATGGAAGATGTGTGGAAAGACATCAACCTTGCTTCCTTGACTGACCACAGTACCCACCACACAACCACCACCACTACCTCCAATAACTTGCCAGATGTAAATTTCCAAGACTTTCTCACTCCACCCTTGAATTTCACCATAGCTATAGACCCACCAACCACCAGCACTGTCTCCTCTTCTCCCTCAAACACATCATCTTCTCTTCACTCCCCTCTCACTGCCCTCAGCTTGAGCTCACACCATTTTGAACCTCTTAGCCACAAGGACTTGCAATTAGCACAGCCCCATGCTTCAAAGGTGGATCCTTTATGCAACCCATTTCAGAGCCAACTGGTTCATGACTCTTGTGACTCTCTGTCCTCTTTTGGGAACAAGAGATTTCTTGAATCTGATGACGGCAACTCAAGGGACAGGAGAACTAAGCGAATGATGAAGAACAGAGAATCTGCTGCCCGATCAAGAGCCAGAAAGCAGGAAAATATTGTTTCTTTCTTAATTTCCATCTCAATAAGCTGGCTTACACATTTGAGTTGCAGCAAAAAATTGAGCTCTTGTTTTGCAACAAATGGTATCATGCATAGTTTTCCTTATTTTGCTTGCAGTTGTTGTGTGATGCTGCAGCCAATCAGCAGCAGAACAAGAAAGGCAGTCTATATCGAACATCTACAGCTCCATTTTAAGAATGATTTATTTAGAGGCTTTCTTATGCCCAGAGCCATCTCCCACTAA 921 0.4343 MLPSSNSKGECNCSGNNKGSSSDQSSKPDRSSSSSFSSTTTRLSLSPSSSSTPNVLQIPKSNKTMEDVWKDINLASLTDHSTHHTTTTTTSNNLPDVNFQDFLTPPLNFTIAIDPPTTSTVSSSPSNTSSSLHSPLTALSLSSHHFEPLSHKDLQLAQPHASKVDPLCNPFQSQLVHDSCDSLSSFGNKRFLESDDGNSRDRRTKRMMKNRESAARSRARKQENIVSFLISISISWLTHLSCSKKLSSCFATNGIMHSFPYFACSCCVMLQPISSRTRKAVYIEHLQLHFKNDLFRGFLMPRAISH. 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02995 306 Gene3D - 201 228 - -
Seca12g02995 306 Pfam bZIP transcription factor 200 225 IPR004827 GO:0003700|GO:0006355
Seca12g02995 306 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 205 220 IPR004827 GO:0003700|GO:0006355
Seca12g02995 306 MobiDBLite consensus disorder prediction 1 59 - -
Seca12g02995 306 MobiDBLite consensus disorder prediction 115 134 - -
Seca12g02995 306 MobiDBLite consensus disorder prediction 194 216 - -
Seca12g02995 306 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 55 222 IPR043452 GO:0003700|GO:0045893
Seca12g02995 306 SUPERFAMILY Leucine zipper domain 202 229 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02995 Seca-Chr12 57615503 57616806 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g02995 64 223 bZIP Transcription Factor Family AT4G35900 41.667 2.21e-18 80.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Seca12g02995 bZIP_1 1.9e-06 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02995 K14432 - gmx:106796563 130.183