Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02994 ATGGATTTTAATAGTGATGATTCAACTGTTAATTTTGAGGATGATAGAGACGTTAGTTATAGTGAGTCTTCTAGCAGTGATGAAATGAGTAGTGAAAATGATATACATAGTGATGAGGAAAATGTGTCTAACCTTCAAGCAGAGGCTGATATGGATGATGGGAATGATGTTATGGATACAGATGTTAGAGAGGATGTGTCAATGAGGATAATAGACTTGACAAGAGCTGATATATTGGCTCTGGAGTTCTCTACTGAAAACGATGCGTTCAATTTTTATTTTTCTTATGCGAGATGTCATGGATTTGCTATAAGGAAGGATGATAGAATTCGAGACAGTAAAGGAATGGTCATAATGCGGCAGTATTTATGTAGTAGGGCTGGTTTGAGGGACAAAAAGCATTTGATTAGGTTAGATGGAAAAAAGGAACAAAGACCTCTTACCCGTACCAACTATCTAGCTAAGTTGAGAGTTAGGTTTGATTATAAGTCTGCCAAATTCAAGGTTGTTTCATTTGAAGACTCTCACAATCATGATTTAACCCCTGCTAAGTTTGTACCTCTAATTCCTGCATATCGGGGATTGACTGATGGGGACAAAGCCCAAGTGGATGCATTGCATTCTCATGGTGTTAGACCTTGCCAGATAATGTGTTTTCTTGTTGATCAGAAAGGAGGCTATAGAAATGTTGGATTTTCAAAGAAAGATTTGTATAACTACATTGATGAGGTTAAGCGTGGTAAGATCAAGGATGGGGATGCAGTTGTTGGCTTAAGTTATTTGCAAGGAAAGGCAGATAATAATCCAATGTTTTTTTCAAGATTCTTATGTTCTGAGGATGGTAAACTTACTCATCTATTTTGGTGTGATGCAAATAGTCGTGCAGATTTTCAATTTTTTAGGGATGTGCTTGCATTTGATGCAACATACAAGAAGAACAGATATAAATATCCATTGGTCATATTTTCTGGGAAAAATCACCACTCTCAAACAATAATATTTGGGTGTGCACTCATTGCTGATGAAACAAGTGATACTTAA 1041 0.365 MDFNSDDSTVNFEDDRDVSYSESSSSDEMSSENDIHSDEENVSNLQAEADMDDGNDVMDTDVREDVSMRIIDLTRADILALEFSTENDAFNFYFSYARCHGFAIRKDDRIRDSKGMVIMRQYLCSRAGLRDKKHLIRLDGKKEQRPLTRTNYLAKLRVRFDYKSAKFKVVSFEDSHNHDLTPAKFVPLIPAYRGLTDGDKAQVDALHSHGVRPCQIMCFLVDQKGGYRNVGFSKKDLYNYIDEVKRGKIKDGDAVVGLSYLQGKADNNPMFFSRFLCSEDGKLTHLFWCDANSRADFQFFRDVLAFDATYKKNRYKYPLVIFSGKNHHSQTIIFGCALIADETSDT. 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02994 346 PANTHER OS01G0519700 PROTEIN 79 345 - -
Seca12g02994 346 Pfam FAR1 DNA-binding domain 91 181 IPR004330 -
Seca12g02994 346 MobiDBLite consensus disorder prediction 1 39 - -
Seca12g02994 346 Pfam MULE transposase domain 303 345 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02994 Seca-Chr12 57603080 57604120 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca12g02994 FAR1 2.2e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02994 - - ccaj:109794460 371.703