Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02974 ATGCTTCAAGTAATTGAGGCTATATTGAAGAATCCCGATGACAAAACTCAAATATCATTGCTTTATGCTAATGTCTCCCCAGATGACATAATGCTTAAACAGAAGCTTGACATTCTAGTAACAAGCCACCCAAACTTAAAAGTATTCTACATTGTACATAATCCAACTAAAAACTGGAGAGGAGGTGCAGGTCACATATCAAAGGAGGTGGTTATGAAAGGCTTACCTGGTCATAGTGATGATACTCTTATAGAGTTTTTCTTTTCAAGTAAAAGCTATATAGCATTAAGGGAGCTCTTCTAA 303 0.3597 MLQVIEAILKNPDDKTQISLLYANVSPDDIMLKQKLDILVTSHPNLKVFYIVHNPTKNWRGGAGHISKEVVMKGLPGHSDDTLIEFFFSSKSYIALRELF. 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02974 100 PANTHER NADH-CYTOCHROME B5 REDUCTASE 1 84 IPR001834 GO:0016491
Seca12g02974 100 Pfam Oxidoreductase NAD-binding domain 1 83 IPR001433 GO:0016491
Seca12g02974 100 Gene3D - 1 89 IPR039261 -
Seca12g02974 100 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 1 83 IPR039261 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02974 Seca-Chr12 57068231 57068884 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g02974 1 84 NADPH P450 reductases AT5G17770 45.882 4.31e-22 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02974 K00326 - gmx:100781191 155.221
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g02974 12 57068231 57068884 Seca12g02974 12 57068231 57068884 ECH