Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02963 ATGAAGTCCCTCTTTCCAAAGCAGCTTTCTGGATGGCTTCTAATCATTTGTTGTTCTGCCATTGGCATAATCTTTCAACATGTTTCTGCTGTGAGTCTACCAAACAATGAAACTGTGCCAGCAGTCATTGTATTTGGGGACTCTATAGTAGATACAGGAAACAACAACTATATCATGACTCTTACCAAATGTGATTTCCCACCATATGGTAGAGATTTTGCTGAAGGAAATCATCCAACCGGGAGGTTCAGCAATGGCTTAGTCCCATCAGATATCATTGCTGCAAAATTTGGAGTTAAGAAGCTTTTACCTGCTTATCTTGATCCTAATTTGCAACTTCAAGATCTCCTAAGTGGTGTAAGCTTTGCCTCTGGTGGTGCAGGATATGATCCTTTAACATCTGAATTAGCATTTGTGATATCATTATCAGGTCAATTAGATATGTTCAAGGAGTACATACAAAAGATAGAGGAAGCAGTTGGAAGAAACAGAACAGCAACAATAGTATCAAAGAGCATATACATAATTTGCATAGGAAGTGATGACATTGCCAATACTTATGCTCAATCACCATTTAGGCGTTATCAATATGATATTTCATCATATACGGACTTAATGGCTTCAGAAGCCTCAAATTTCTTACAGGAGCTTTATGGAGTAGGAGTTAGAAGGATTGGAGTATTCAGTATACCAGTTATAGGGTGTGTTCCCTCACAGAGAACAATTGGTGGAGGTATATTCAGAACATGTTCACATTCTTCTAACCAAGCAGCAATACTCTTCAACTCAAAGCTCTTCTCCCAAATGAGTGCACTTCAAAAGAAGTTTTCAGACGCTAGACTTGTCTATCTTGATTCTTACAATCCATTGCTGGACATCCTTCAAAACCCTGATAAATATGGTTTTAAAGAGACAGAGAAAGGATGCTGTGGCACAGGGGATATAGAAGCCAGCATTTTGTGCAACCGTTACAGCATAAACACATGCTCAAATTCTTCTAACTATGTTTTCTGGGATAGTTATCATCCTACAGAGAAGGCTTATAATGTGCTTAGCTCTCTAGTGCTTGATAACAAAATCAAAATGAAGCTTTCCACCCTTAAAACGCTTTATGTTTGTCCTTTTCTAGTTCTGTTTTATCCATTTGTTATAACAGCTATGTCAAGACCTCATAACATGAGCCTTTCAGTTCCTGCTGTTATAGCTTTTGGTGATTCAATCCTGGATACTGGTAACAACAATTATATTGAAACAAGTATTAAGGCAAATTTCAAACCATACGGGAGGGATTTCATTGGACAAAAAGCCACAGGAAGGTTTAGCAATGGCAGACTCCCTTCAGACTTATTTGTTGAAATATTTGGCATTAAGGGGGCCTTGCCACCCTATCTTGATCCAAATTTGAAGATTCAAGACCTCTTAACTGGGGTGTGTTTTGCCTCTGCCGGTTCAGGCTATGATCCTATTACAGTTGAACAAGCATCAGTGTTGTCAGTAGAGGATCAACTAAAAATGTTCAAAGAGTACATAGGAAAACTGAAGGCAACTGTGGGGGAAAGTAGGACTGCTTTCATTCTAGCAAACAGCATAGTTATCATCAGCATGGGAAACAATGACATTATAAATACATATTTTCTAACACCATACCGGAAGGATGAGTTTGATGTTGAACAGTATACAAGTATGCTGGTCAATTTGTCTTCAAAATTTATAGAGGAACTTTATCAATTGGGAATAAGAAGGATTGGAGTATTCGGCTTACCACCAGTGGGATGTGTGCCCCTGCAAAGAACAATAAACGGAGGCAAGGAAAGGGAATGTGTTGAAGCAGTAAACCAGGCAGCCATGATCTACAACTCCAAACTTTCTACTTCAACTATGGATCTCAACAACAAACTTCCACCTGATGCTAGGATTGTGTACCTTGAAACCTATAAAGAAACTGATGATATGATCCAACACCACGATCTATATGGATTTGATGTGTCGGATAGTGCATGTTGTGGCATTGCAAATGTGGAAGTTGGCCCTCTCTGTAGTTCTCTCGCCTTAAAAATCTGTGAAGATGCCTCTAAATATGTTTTCTGGGACAGTTATCACCCCACGGAGAGAGCTTATGTTATACTTGTCTCAGAGATCCTAAAAAATTACAGTCATAAGTTTCTTTGA 2169 0.3882 MKSLFPKQLSGWLLIICCSAIGIIFQHVSAVSLPNNETVPAVIVFGDSIVDTGNNNYIMTLTKCDFPPYGRDFAEGNHPTGRFSNGLVPSDIIAAKFGVKKLLPAYLDPNLQLQDLLSGVSFASGGAGYDPLTSELAFVISLSGQLDMFKEYIQKIEEAVGRNRTATIVSKSIYIICIGSDDIANTYAQSPFRRYQYDISSYTDLMASEASNFLQELYGVGVRRIGVFSIPVIGCVPSQRTIGGGIFRTCSHSSNQAAILFNSKLFSQMSALQKKFSDARLVYLDSYNPLLDILQNPDKYGFKETEKGCCGTGDIEASILCNRYSINTCSNSSNYVFWDSYHPTEKAYNVLSSLVLDNKIKMKLSTLKTLYVCPFLVLFYPFVITAMSRPHNMSLSVPAVIAFGDSILDTGNNNYIETSIKANFKPYGRDFIGQKATGRFSNGRLPSDLFVEIFGIKGALPPYLDPNLKIQDLLTGVCFASAGSGYDPITVEQASVLSVEDQLKMFKEYIGKLKATVGESRTAFILANSIVIISMGNNDIINTYFLTPYRKDEFDVEQYTSMLVNLSSKFIEELYQLGIRRIGVFGLPPVGCVPLQRTINGGKERECVEAVNQAAMIYNSKLSTSTMDLNNKLPPDARIVYLETYKETDDMIQHHDLYGFDVSDSACCGIANVEVGPLCSSLALKICEDASKYVFWDSYHPTERAYVILVSEILKNYSHKFL. 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02963 722 Pfam GDSL-like Lipase/Acylhydrolase 400 712 IPR001087 GO:0016788
Seca12g02963 722 Pfam GDSL-like Lipase/Acylhydrolase 42 354 IPR001087 GO:0016788
Seca12g02963 722 FunFam GDSL esterase/lipase APG 31 360 - -
Seca12g02963 722 SUPERFAMILY SGNH hydrolase 41 374 - -
Seca12g02963 722 SUPERFAMILY SGNH hydrolase 519 717 - -
Seca12g02963 722 Gene3D SGNH hydrolase 27 362 IPR036514 -
Seca12g02963 722 Gene3D SGNH hydrolase 389 720 IPR036514 -
Seca12g02963 722 FunFam GDSL esterase/lipase APG 389 718 - -
Seca12g02963 722 CDD SGNH_plant_lipase_like 398 717 IPR035669 -
Seca12g02963 722 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 42 53 IPR008265 GO:0006629|GO:0016298
Seca12g02963 722 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 400 411 IPR008265 GO:0006629|GO:0016298
Seca12g02963 722 PANTHER GDSL ESTERASE/LIPASE EXL3 25 353 - -
Seca12g02963 722 CDD SGNH_plant_lipase_like 40 358 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02963 Seca-Chr12 56679571 56691197 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g02963 396 716 Pollen Coat Proteome AT1G75910 41.176 3.01e-76 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02963 - - ahf:112723705 1016.91