Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02947 ATGGTTTTTGTTTCAAAAATTGGCTTATCTCTCTGTATGCTGGTAACTATACTTATTACTTTGCAGTTCAATGGTGGTAGTGCATTGCCATTATTTCCTAACGTAACTTTTGGTAATCCTAAAATAACTGTTCAAATTACCAACGTGTTACGTAATGGTTCTGAGTTGGGTCTTCATTGCAAAGACAAGAATCATGATCTTGGGTTTCATGTTCTACCCGTTGGAGAAATGTACAGCTTCAGATTTCAGCCTTGTGTCATCGGTTGTGATACGTTGTACTTTTGTAGGTTTACTTGGACAACAGTAGTACACCACTTTGACATCTATGTTCAAAAGCGAGATTCTTATGCTAAAATATTTGATTGGGAAATACTAGAATCAGGACCATGTATGATTAAAAAGGATTCATTGGAATGCTTTCAATGGAAAAATGAGAGAAAGGCAGCGTGA 450 0.3622 MVFVSKIGLSLCMLVTILITLQFNGGSALPLFPNVTFGNPKITVQITNVLRNGSELGLHCKDKNHDLGFHVLPVGEMYSFRFQPCVIGCDTLYFCRFTWTTVVHHFDIYVQKRDSYAKIFDWEILESGPCMIKKDSLECFQWKNERKAA. 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02947 149 PANTHER - 40 134 IPR010264 -
Seca12g02947 149 Pfam Plant self-incompatibility protein S1 43 142 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02947 Seca-Chr12 56235309 56235758 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g02947 17 136 Carbohydrate Esterase AT3G16970 39.200 6.10e-24 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02947 - - cam:101507265 131.724