Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02906 ATGAAGTTTACATCAATTGAAGATGTAAAGAATCACTATCGAAGGTATGGAAAGAATAAAGGTTTTAGGTTTTGCATGGGTTGTATTACTAAATCAAGAACAAATGGTATGATGATTGGTCAAGAGTTCATTTGTTCAAAGGAGGGATTTCGAAAAAATGGAGAAAAGGTAAATGGAAACTTTTCAACACATGATGAAACAAGGGTAGGATGCAAGGCAATGCTTTATATAAAGAAAAATGAAGATGGTTGA 252 0.3254 MKFTSIEDVKNHYRRYGKNKGFRFCMGCITKSRTNGMMIGQEFICSKEGFRKNGEKVNGNFSTHDETRVGCKAMLYIKKNEDG. 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02906 83 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 1 83 - -
Seca12g02906 83 Pfam FAR1 DNA-binding domain 12 83 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02906 Seca-Chr12 54615572 54615823 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca12g02906 FAR1 8.9e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02906 - - tpra:123904109 111.694