Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02897 ATGGCTGGGCAATCAGACCATGAGCTCTCATTGTTTTCAGCAGAGGAGCTTGAGTTCATTTCTGAGGATGAGATCGTAGACATTGTACCCAATCTCAAAATGGATCCTCTCTGTCTCATCTCCGGAGATTTTGGCCCATTTACGCCACAAATTGTTACTCAAGTACAACTGTGGCTGGCTATTGCTCTCAAGAGAGGCAAATGCTCCATTCGCCCTCCTCAGTGGATGTCTGTTGAAATCTCAAGACTTCTTTTTGATCATGCTCGTGACAACATTCCCGATGTATATATGGTGAGGTCTCTAATTGAGGACATCAGAGATGTAAGGTTTCATAAAGTTGAAATTGATTTGGAGGCATTTAATGGACGTACAATTGTTGTTAAGGTAATTTTCCAAGTTTTTTTTGGGTGTTTATTTGGAGATGTCTGTAATGCAGCTCTGATTGTAAAGGGCATCTTTTTATCAGAATTCAAGTTTTTTGATCTACTGGTAGAATTTTATGCTACCAGTGTGCCATATGGTTTCAGTTACTTTAGTGATTTGTTTCTTTCCTGTTTACTGTATATGGCCATTCTAATCTTAAAGATCAAAAATTTATCTGCAATGGAAGTGAATATTGTTCGCCCATTTATTGGAAGAGCTTTACAGGCATTTTATAAGCATGATAATCCAGAGTTGATCCCGGATCCAGAGAGAGTGTCAGACAGATGGACGCAAGTTGTCAGCAATGTCCCAAGAGAAATGGTTTTAATGCAACTGATATTTGCTTTTGCAGAGGCAACTTCGAAGATAAATATGTATTACTTTTCTGGTAACATCTCTTCTAGAATTGTAAATCTGGCTGGCTTCAAAGATACATCATTCCTGAGAAGTACTCCACAACTATCTTTGCTGCTGATTTCATTGTAA 909 0.385 MAGQSDHELSLFSAEELEFISEDEIVDIVPNLKMDPLCLISGDFGPFTPQIVTQVQLWLAIALKRGKCSIRPPQWMSVEISRLLFDHARDNIPDVYMVRSLIEDIRDVRFHKVEIDLEAFNGRTIVVKVIFQVFFGCLFGDVCNAALIVKGIFLSEFKFFDLLVEFYATSVPYGFSYFSDLFLSCLLYMAILILKIKNLSAMEVNIVRPFIGRALQAFYKHDNPELIPDPERVSDRWTQVVSNVPREMVLMQLIFAFAEATSKINMYYFSGNISSRIVNLAGFKDTSFLRSTPQLSLLLISL. 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02897 302 FunFam DNA replication complex GINS protein PSF2 12 76 - -
Seca12g02897 302 CDD GINS_B_Psf2 13 73 - -
Seca12g02897 302 CDD GINS_A_psf2 65 223 - -
Seca12g02897 302 SUPERFAMILY PriA/YqbF domain 12 70 - -
Seca12g02897 302 PANTHER DNA REPLICATION COMPLEX GINS PROTEIN PSF2 7 79 IPR007257 GO:0005634|GO:0006260
Seca12g02897 302 SUPERFAMILY GINS helical bundle-like 72 122 IPR036224 -
Seca12g02897 302 Gene3D - 12 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02897 Seca-Chr12 54213273 54216675 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g02897 1 121 Core DNA Replication Machinery Family AT3G12530 57.143 3.05e-52 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02897 K10733 - gmx:100780528 207.223