Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02866 ATGATTGCAATAGGAGCTGCAAGGGGCTTGGAATATCTTCATGAAGCAGCTGCTCCAAGAATTCTTCATAGAGATGTCAAATCAACTAACATTCTTTTGGATGAAAATTGGCAAGTAAAGGTACGAATCTTGTTTGTTCATGGATGGTAA 150 0.38 MIAIGAARGLEYLHEAAAPRILHRDVKSTNILLDENWQVKVRILFVHGW. 50
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02866 49 Gene3D Transferase(Phosphotransferase) domain 1 1 42 - -
Seca12g02866 49 ProSiteProfiles Protein kinase domain profile. 1 49 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca12g02866 49 PANTHER OS01G0750732 PROTEIN 2 41 - -
Seca12g02866 49 SUPERFAMILY Protein kinase-like (PK-like) 2 41 IPR011009 -
Seca12g02866 49 Pfam Protein kinase domain 6 41 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca12g02866 49 ProSitePatterns Serine/Threonine protein kinases active-site signature. 21 33 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02866 Seca-Chr12 53082484 53082633 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g02866 2 41 Receptor kinase-like Gene Family AT2G28250 87.500 5.01e-21 81.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XVI Seca12g02866 Pkinase 2.3e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02866 - - gmx:100305419 82.8037