Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02845 ATGGATAATTTGCTTCTACAAGCAAAATCCGCAGTGACTGACCCTCTCTTCCTCATTATCCCGCTAACTCTGTTACTGATTGGTTTAGTATCACGAATCCGCCGAAACGCACCGTATCCACCAGGCCCAAAAGGCCTTCCCATAATAGGCAACATGGACATGATGGACCAACTAACACACAGAGGCTTAGCAAACTTAGCAAAGCAATACGGCGGCGTTTTCCACCTCCGCATGGGGTTTCTCCACATGGTGGCAATTTCAAACGCAAAAGCAGCGCGTGAAGTGCTCCAAGTGCATGACAACATTTTCTCTAACCGCCCAGCCACCATAGCCATCAAATACCTCACTTATAACCGTTCTGACATGGCTTTTGCTCATTACGGTCCCTTCTGGCGCCAGATGCGAAAGCTCTGCGTCATGAAACTCTTCAGCCGCAAACGTGCTGAGTCATGGCAATCCGTTAGAGATGAAGTTGACGATCTCGTACGCGCCGTCGCTGCCAACGTCGGAAAGCCGGTGAACGTAGGGGAGATGGTGTTTAATCTCACGAAGAATATCACGTATCGTGCTGCTTTTGGGTCTAGTTCGAAGGAAGGACAAGATGAGTTCATTGCGATACTGCAAGAGTTCTCGAAGCTGTTTGGAGCTTTTAATATATCGGATTTTGTTCCCTACCTTGGGTGGATTGATCCGCAGGGTATCAACTCTAGGCTCGTTAAGGCTCGTGCTGCACTTGACCGTTTCATTGATAAGATTATCGATGAACATGTGGAGAAAAAGAAGAAGGGGAGTAACGGTGATGAAGATAATGACATGGTTGATGAGTTGTTAGCTTTTTGCAGTGATGAGGCAAAATTGAGTGATGAATCGGACGATCTGCAGAACTCCATCAACATCACCAGGGTTAACATCAAAGCCATCATCATGGATGTGATGTTCGGAGGGACAGAGACAGTGGGGTCAGTGATAGAATGGGCGATGTCAGAATTGATGAGAAGTCCAAAAGACCTAAAGCGGGTGCAAGAAGAACTTTCCACCGTGGTGGGCTTGGATCGTCCTGTGGAGGAGTCAGACATCGAAAAACTCACACACTTGAAATGCGCCATCAAGGAGACACTACGCCTCCACCCGCCAATCCCCTTGCTCCTCCATGAGACGGCAGAGGATGCAATAGTGACCGGCTACTTCGTCCCTAAGGGCTCGCGAGTGATGATCAATGCATGGGCCATCGGCAGGGATAAGGACTCATGGGAAGACCCTGAAGCATTCAAGCCCTCACGATTCTTGAACCAAGGCGCACCTGATTTTAAAGGGAGCAACTTCGAGTTCATTCCTTTCGGATCGGGTCGAAGGTCTTGCCCTGGGATGCAATTGGGCTTGTATGGGCTAGACTTGGCATTAGCCCACTTGCTTCATTACTTTACATGGGAGTTACCAAATGGGATGAAACCTAGTGAGATGGACACGAATGACGTGTTTGGACTTACCGCTCCTAGGGCAACTCGACTTGTAGCCATTCCCACTAAGCGTGTGGTGTGCCCTCTTTAA 1548 0.4877 MDNLLLQAKSAVTDPLFLIIPLTLLLIGLVSRIRRNAPYPPGPKGLPIIGNMDMMDQLTHRGLANLAKQYGGVFHLRMGFLHMVAISNAKAAREVLQVHDNIFSNRPATIAIKYLTYNRSDMAFAHYGPFWRQMRKLCVMKLFSRKRAESWQSVRDEVDDLVRAVAANVGKPVNVGEMVFNLTKNITYRAAFGSSSKEGQDEFIAILQEFSKLFGAFNISDFVPYLGWIDPQGINSRLVKARAALDRFIDKIIDEHVEKKKKGSNGDEDNDMVDELLAFCSDEAKLSDESDDLQNSINITRVNIKAIIMDVMFGGTETVGSVIEWAMSELMRSPKDLKRVQEELSTVVGLDRPVEESDIEKLTHLKCAIKETLRLHPPIPLLLHETAEDAIVTGYFVPKGSRVMINAWAIGRDKDSWEDPEAFKPSRFLNQGAPDFKGSNFEFIPFGSGRRSCPGMQLGLYGLDLALAHLLHYFTWELPNGMKPSEMDTNDVFGLTAPRATRLVAIPTKRVVCPL. 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02845 515 CDD CYP71-like 69 503 - -
Seca12g02845 515 PRINTS P450 superfamily signature 314 331 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g02845 515 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g02845 515 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g02845 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Seca12g02845 515 FunFam Cytochrome P450 84A1 32 509 - -
Seca12g02845 515 Gene3D Cytochrome P450 32 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g02845 515 SUPERFAMILY Cytochrome P450 40 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g02845 515 Pfam Cytochrome P450 40 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g02845 515 PANTHER CYTOCHROME P450 84A1-RELATED 16 515 - -
Seca12g02845 515 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g02845 515 PRINTS E-class P450 group I signature 406 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g02845 515 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g02845 515 PRINTS E-class P450 group I signature 303 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g02845 515 PRINTS E-class P450 group I signature 323 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g02845 515 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g02845 515 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g02845 515 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02845 Seca-Chr12 51994800 51999834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g02845 1 515 Monolignol Biosynthesis Gene Families AT4G36220 72.169 0.0 756
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02845 K09755 - gmx:100807448 826.239