Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02841 ATGGGATGTCAAGCAGCACTTATTGTATCAAAGGACAAGAATCGGGACATATGGGTTATAAAATCTTTTGACAATAACCATAATCATGTGATGGCTAGTCCTAAGAGTGTGTCTTATTTGAGGTGTCATAAAAAAATGGGTGTTGCTACAAAAAATCTTGTTGAGAGGTTTAATAAAGAAGATGATTTGAAACGTATAATGGAAGCATACAAGTTGGAAGAAAATGAGTGGCTTAAAGAAGCACTTTTTTTTACTGATATGAATACTACACAAAGAAGTGAGAGTATCAATTCTTTCTTTGACTCGTTTGTTGATGCATCCACAACATTACGAGACTTTATGGTGAAATTCGAGAAGGCTTTGTGTAATCGTTATGAGGATGAAAAAAGAGAGGATTTTGAGTCTAGACATAAATCCCGCATTTTAAGCATCGGCTCCAAAATTAAGGAGTATGCTGCATCAATCTATACTAGAAATGTGTTTGATGTCATTCGAATTCCTAGTCAATATGTTTTGCAACGCTGGACAAAAGAAGCCAATAGATGTATTGAGGTTAGTGATGTGGATAGTCAGAAGCATGATTTAGATGTGTTAAGAAGTGGGCATGTACATCGTAAATTTGACAAATTTTTTTATTTGGCTGAAAAATAA 651 0.3441 MGCQAALIVSKDKNRDIWVIKSFDNNHNHVMASPKSVSYLRCHKKMGVATKNLVERFNKEDDLKRIMEAYKLEENEWLKEALFFTDMNTTQRSESINSFFDSFVDASTTLRDFMVKFEKALCNRYEDEKREDFESRHKSRILSIGSKIKEYAASIYTRNVFDVIRIPSQYVLQRWTKEANRCIEVSDVDSQKHDLDVLRSGHVHRKFDKFFYLAEK. 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02841 216 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 63 190 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02841 Seca-Chr12 51661316 51662882 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca12g02841 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02841 - - mtr:120575977 173.326