Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02830 ATGGGGCGAGTTCGAATGAAAACGGTGAAGAAGTCGTCTCGGCAAGTGATAGAGAGGCACTACTCTCGGATGACGTTAGACTTCCAAACGAACAAGATGGTTCTGGAGGAAGTGGCGAGCGTGCTCTTGATTGGGGTCTTGGTGGTGGCCCTAACCACATTGCCTCAAGAAGATTTAGATTTGGAGGTACTGAACTTACTAATTTTCTGGCTCAAGAACTTGGCAAATTCAATTCACTATGTGGGGTCCAATGATTCCCATACTCGCATGTTGGACCACCAAGAGTTGAAGAGGCGTGCCAGTGATAACTACTCTGTTGCACACAGTGCAAATTGTCGAGGAAGAGTCACACACGCTTTAAGTGATGATGCTTTTGCTCAAGGAGTGTTTGGTAAACTCTACAGGGGCACTTACAATGGTGAAGACGTTGTTATCAAAATCTTGGAGAGGCCTGAAAATGATCCAGCAAAGGCTCAGTTGATGGAACAATAG 492 0.4593 MGRVRMKTVKKSSRQVIERHYSRMTLDFQTNKMVLEEVASVLLIGVLVVALTTLPQEDLDLEVLNLLIFWLKNLANSIHYVGSNDSHTRMLDHQELKRRASDNYSVAHSANCRGRVTHALSDDAFAQGVFGKLYRGTYNGEDVVIKILERPENDPAKAQLMEQ. 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02830 163 Gene3D Phosphorylase Kinase; domain 1 119 163 - -
Seca12g02830 163 PANTHER 40S RIBOSOMAL PROTEIN S17 1 41 IPR001210 GO:0003735|GO:0005840|GO:0006412
Seca12g02830 163 Gene3D - 1 78 IPR036401 GO:0003735|GO:0005840|GO:0006412
Seca12g02830 163 SUPERFAMILY Rps17e-like 1 41 IPR036401 GO:0003735|GO:0005840|GO:0006412
Seca12g02830 163 Pfam Ribosomal S17 1 41 IPR001210 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02830 Seca-Chr12 51187669 51188471 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g02830 81 158 MAP Kinase Kinase Kinase AT2G24360 44.144 1.12e-18 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02830 - - gmx:100788536 141.739