Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02824 ATGGGTGTGGGGGTTGGATTATTCACCAGAAAAGGGAAAAGAAGAGTTTTTTATGATATGGGATGGATTATAGGACTATGGGCTTTGATGGGTATCCTTTTATTATGGTTTCTTTGTGTGAAGAAGGAGAATACAGTGAGAAAGAAGAAGAAGAAGAAGAAGGGAAACGTTCCAAAAGGGAACATAGGTTGGCCTTTACTTGGAGAGACTCTTGATTTCATTGCTTGTGGCTACACTTCTAATCCTGTCAGCTTCATGGAAAAGCGCAAGTCTCTGTATGGTAATGTATTTAAGACAAGCATTTTGGGAAGTGGTGTGATTGTGTCGACAGAGCCAGAAGTGAACAGGGTAGTTCTGCAGAACCAGGGGAACATCTTCGTCCCTGCTTACCCAAAATCAGTTAGGGAGCTAATGGGAGAACACTCTATACTCCAAATGAATGGGACTATGCATAGGAAACTTCATTCACTCCTTGGAGGCTTCCTCCGTTCCCCACAACTCAAAGCTCGAATCACCACAGATATTCAACACTCTGTCCAACAATGTTTTGCTTCTTGGACCCACCAACCAATTTACATTCAAGATCAAGTAAAAAAGATTACGTTTACTATATTGGTTAAAGTTCTGATGAGCGTTGGTCCGGGTGAAGATTTAGACTTCTTGAAGAGAGAATTTGAAGAGTTCATCAAAGGGTTGATTTGTTTACCCCTCAAGTTTCCAGGAACAAGACTATATAAATCCTTAAAGGCTAAGGAGAGAATGATGAAGATTGTGCAAAGGATAATAGAGGAAAGAAAAAATAATATCCATAAGAATAATAAGGATTCAGAGAATGATATACTGGATGTGCTCTTAGGGGATAAAGGTGACTCCAACTGTATCTCTAACTTGTCGGTGAAAAATATCAGCGAGAACATCATTGAGATGATGATCCCTGGGGAAGAGACTCTTCCAACGGCTATGACCATGGCTGTCAAGTTTCTCAGTGACTATCCTCTTGCTCTATCCAAATTAGTGGAGGAGAACATGGAACTGAAGAAGCGGAAGAATTGTTCAGATGATTATGCATGGACTGACTACTTGTCACTGTCATTTACACAAAATGTTATCAGCGAAACTCTGAGAATGGCAAACATTGTCAATGCCATTTGGAGAAAAGCAGTGAAAGACGTAGATATTAAAGGGTACCTAATTCCTAAGGACTGGTGTATTGTGGCATCTCTTACTTCTGTTCATTTGGATGGCATGAACTACGAAAACCCTTTTGAGTTTGATCCATGGAGATGGGAGAAAATTGGAGCTGGAACTAGTAGTAGTAACCACTGTTTCACACCATTTGGTGGTGGACAGAGACTCTGCCCTGGGATAGAACTCTCCAGGCTAGAGCTCTCTATTTTCCTTCACCACCTAGTGACTACTTACAGATGGGTTGCCGAAAGGGATGAAATTATTTACTTTCCAACAGTGAAGTTGAAGAGGAAGCTCCCAATTAGTGTGACAAAAATTAACACCTGA 1515 0.4079 MGVGVGLFTRKGKRRVFYDMGWIIGLWALMGILLLWFLCVKKENTVRKKKKKKKGNVPKGNIGWPLLGETLDFIACGYTSNPVSFMEKRKSLYGNVFKTSILGSGVIVSTEPEVNRVVLQNQGNIFVPAYPKSVRELMGEHSILQMNGTMHRKLHSLLGGFLRSPQLKARITTDIQHSVQQCFASWTHQPIYIQDQVKKITFTILVKVLMSVGPGEDLDFLKREFEEFIKGLICLPLKFPGTRLYKSLKAKERMMKIVQRIIEERKNNIHKNNKDSENDILDVLLGDKGDSNCISNLSVKNISENIIEMMIPGEETLPTAMTMAVKFLSDYPLALSKLVEENMELKKRKNCSDDYAWTDYLSLSFTQNVISETLRMANIVNAIWRKAVKDVDIKGYLIPKDWCIVASLTSVHLDGMNYENPFEFDPWRWEKIGAGTSSSNHCFTPFGGGQRLCPGIELSRLELSIFLHHLVTTYRWVAERDEIIYFPTVKLKRKLPISVTKINT. 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02824 504 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g02824 504 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g02824 504 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g02824 504 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g02824 504 PRINTS E-class P450 group I signature 407 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g02824 504 PRINTS E-class P450 group I signature 90 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g02824 504 CDD CYP90-like 89 501 - -
Seca12g02824 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Seca12g02824 504 Gene3D Cytochrome P450 46 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g02824 504 FunFam 3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1 47 502 - -
Seca12g02824 504 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g02824 504 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g02824 504 PRINTS P450 superfamily signature 312 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g02824 504 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g02824 504 SUPERFAMILY Cytochrome P450 53 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g02824 504 PANTHER CYTOCHROME P450 26 53 477 - -
Seca12g02824 504 Pfam Cytochrome P450 58 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02824 Seca-Chr12 50934294 50944171 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g02824 57 395 Cytochrome P450 AT4G36380 64.516 1.19e-161 463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02824 K12637 - gmx:100812489 820.846