Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02804 ATGTCAACGGAAGCGCCGAAGCGCGACCAGTGGCAGTGGGAGAACGCCACTGCTGGCGCCGCCGCTGGATTCGCCACCGTCGCTGTCATGCATCCCCTCGACGTTGTCCGAACTAGGTTCCAAGTTAACGATGGTCGAGTCTCTCATCTTCCCAGTTACAAGAACACCGCTCACGCCGTTTTCACCATTGCTCGCTCTGAGGGATTAAGAGGGTTATATGCAGGCTTTCTTCCTGGGGTTCTTGGGTCAACTATTTCATGGGGTTTATATTTCTTTTTCTATGACAAGGCTAAACAAAGATATGCTAGGAACAGAGAGGAAAAGTTGACCCCAGGTCTTCATCTTGCCTCAGCTGCAGAAGCAGGAGCTTTGGTTTGCTTGTGCACAAATCCTGTTTGGCTAGTGAAAACAAGATTACAGCTTCAGACTCCTCTTCATCAGACAAGACCATACTCTGGGCTTTATGATGCATTTAGGACCATAATGAGGGAAGAAGGATTTAGTGCACTTTACAGAGGGATTGTTCCTGGTCTATTTCTGGTGTCTCATGGTGCTATTCAGTTCACAGCATATGAGGAGCTTCGTAAAATTATTGTCGATTTGAAGAGTAAAGGAAGTAAAATACACCATCAAAACCCTGATCAATTGTTGAATTCTGTTGATTATGCTGTTCTTGGAGCAACATCAAAAATTGCTGCAATACTTCTGACCTATCCCTTTCAGGTTATACGTTCTCGATTGCAGCAACGACCTAGTGGTGATGGGGTTCCAAGATATATGGACAGTTGGCATGTTGTGAAAGAAACTGCACGGTACATATTAAAACTAAAACGCATCCAGATTTATTTTGCGTCTTTAAATTGA 864 0.4456 MSTEAPKRDQWQWENATAGAAAGFATVAVMHPLDVVRTRFQVNDGRVSHLPSYKNTAHAVFTIARSEGLRGLYAGFLPGVLGSTISWGLYFFFYDKAKQRYARNREEKLTPGLHLASAAEAGALVCLCTNPVWLVKTRLQLQTPLHQTRPYSGLYDAFRTIMREEGFSALYRGIVPGLFLVSHGAIQFTAYEELRKIIVDLKSKGSKIHHQNPDQLLNSVDYAVLGATSKIAAILLTYPFQVIRSRLQQRPSGDGVPRYMDSWHVVKETARYILKLKRIQIYFASLN. 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02804 287 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 12 272 IPR044712 GO:0006862|GO:0055085
Seca12g02804 287 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 197 IPR018108 -
Seca12g02804 287 FunFam Folate transporter 1, chloroplastic 106 275 - -
Seca12g02804 287 Pfam Mitochondrial carrier protein 11 104 IPR018108 -
Seca12g02804 287 Pfam Mitochondrial carrier protein 110 199 IPR018108 -
Seca12g02804 287 Gene3D Mitochondrial carrier domain 107 275 IPR023395 -
Seca12g02804 287 SUPERFAMILY Mitochondrial carrier 12 271 IPR023395 -
Seca12g02804 287 Gene3D Mitochondrial carrier domain 1 106 IPR023395 -
Seca12g02804 287 FunFam folate transporter 1, chloroplastic isoform X1 1 105 - -
Seca12g02804 287 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 100 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02804 Seca-Chr12 49610518 49620125 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g02804 32 250 Chloroplast and Mitochondria Gene Families AT2G47490 40.265 1.56e-38 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02804 K15115 - gmx:100809599 505.368