Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02787 ATGGTTTGCTTCATACAGCTTGTGGAACACCTGCATATGTTGCTCCTGAAGAAGATAAGCAAAGCAGAGTTTACATGTCCTAAATGGTTCCTAAGAGAAGTTAAGAGGCTATTGTACAAGATGTTGGATCCAAATCCTGACATTAGGATTTCCATAGCTAAGATTAAGCAATGTTCTTGGTTTATGAAAGGGCCAAATAGTAGACAACAAAAACAAGAAGGGGAAAATAGGAATGTCTCTCATGTGACCATAAATCATTCTGATCAAGGTGATGAAAGTGATGAACTAGCAGCACAAGCAAGGCAAGAGCCAGTGGTGCCTATAAGTATAAATGCCTTTGATATCATCTCACTTTCCTCTGGGTTTAATCTATGTGGATTCTTTGAAGACAGCTTTCAGAAAAGGGAAGCAAGATTTACTTCAAGACAACCTGCATCAGTCATCATCTCCAGGCTGGAAAAGATTGCTAAGAGACTGAAGCTTAAAATACAGAAAAGAGCTGCTGGTTTGTTGAAATTGGAGAGCCTTGGTGAAGGTAGGAAGGGGATTTTATCCATTGATGCAGAGATCTTTGAGGTTACTCCATTTTTCCATTTGGTGGAAGTGAAAAAATCAAATGGGAATACATTGGAATATCAGAAAATAATGAAAGAGGATATAAGGCCTGCTCTTCAAGATATTGTTTGGGTTTGGCGAGGTGATCAACAAGAGCAATCAAACTAA 723 0.3873 MVCFIQLVEHLHMLLLKKISKAEFTCPKWFLREVKRLLYKMLDPNPDIRISIAKIKQCSWFMKGPNSRQQKQEGENRNVSHVTINHSDQGDESDELAAQARQEPVVPISINAFDIISLSSGFNLCGFFEDSFQKREARFTSRQPASVIISRLEKIAKRLKLKIQKRAAGLLKLESLGEGRKGILSIDAEIFEVTPFFHLVEVKKSNGNTLEYQKIMKEDIRPALQDIVWVWRGDQQEQSN. 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02787 240 ProSiteProfiles NAF domain profile. 105 129 IPR018451 GO:0007165
Seca12g02787 240 Gene3D Transferase(Phosphotransferase) domain 1 3 109 - -
Seca12g02787 240 CDD CIPK_C 111 225 - -
Seca12g02787 240 Gene3D Kinase associated domain 1, KA1 110 230 - -
Seca12g02787 240 Pfam NAF domain 107 165 IPR004041 GO:0007165
Seca12g02787 240 SUPERFAMILY Protein kinase-like (PK-like) 10 69 IPR011009 -
Seca12g02787 240 FunFam Non-specific serine/threonine protein kinase 105 229 - -
Seca12g02787 240 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 14 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02787 Seca-Chr12 49410195 49411039 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g02787 1 237 CBL-interacting serine-threonine protein kinases AT5G58380 52.529 7.24e-86 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02787 - K07198 gmx:100779316 355.91