Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02776 ATGATTACTACATGTAGATTTGTGTGTTGCAAGGAAGGTGTAAGTAAAAAGGATAAACGAGACTATTTGATTTCTAATCCTAGACCCGAAACTCGAAGCAATTGTCCAGTAATATTAGGCATCACACTTGTAAGAGAATCTGGAAAATACAAAGTGCATGACTTTGTTCATGAGCATAATCATGTTTTGCATCTTCAAGAGACCATTCACATGTTAGTATGTCAAAGAAAATTATCTCAAGTGCAAGCTTATGAGATTAACTTGGCAAATGATTTAGGAATAAATCAAAAGGCTACATTTGAATTAATGAGCAAGCATGTTGGTGGACGCGCAAATCTTGGTTACACACGTTTAGACCAAAAAAATTATCTTCGCACTAAAAGGATGAAAAACTTGGAGTATGGACAAGCAGGTGGTTTGTTGCAATACTTTCAAGAGCAGTTATTGGAAAATCCTTCATTTTACTATGCAGTACAATTGGATATGGAAGAGCAAATAACAAACACTTTTTGGGCAGATGCGAAGATGATTATTGATTATGCCCATTTTGGTGATGTGATTACTTTTGATACTACTTATAGTACCAACAATGCATAG 597 0.3484 MITTCRFVCCKEGVSKKDKRDYLISNPRPETRSNCPVILGITLVRESGKYKVHDFVHEHNHVLHLQETIHMLVCQRKLSQVQAYEINLANDLGINQKATFELMSKHVGGRANLGYTRLDQKNYLRTKRMKNLEYGQAGGLLQYFQEQLLENPSFYYAVQLDMEEQITNTFWADAKMIIDYAHFGDVITFDTTYSTNNA. 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02776 198 Pfam FAR1 DNA-binding domain 2 63 IPR004330 -
Seca12g02776 198 PANTHER OS01G0519700 PROTEIN 5 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02776 Seca-Chr12 49301176 49301772 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca12g02776 FAR1 1e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02776 - - adu:107465301 283.493