Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02771 ATGAGGCTTCAAAATGTTGAAACAAGGTTGAAAGAGCTTAAATCTGCCTTGGTGGCACTTGGTAGAGAAGCAACTGCTGAAATAGTGTCAGTTGAAGAACAACAGCAACAGATAACTCTCCAGAGCCTTTGTACAATGAGGCCAATTTATACTGAATGCAGGTCATCAATTACCAACTCTCCAGTTGCTGGGCTTTCCTCAGAAAATGTTGTCAATGGAGTGATGGTAGGAGAAACAACTGCCTCCACCAGTGATTGGGGCAGCTCAAGCCTAATTATGAATTTTGGGTGTGAATATCACTGTCTCAGGTCATCAATTACCAACTCTCCAGTTGTTGGGCTTTCCTCAGAAAATGTTGTCAATGGAGTGATGGTAAGAGAAACAATTGCCTCCACCAGTGATTGGGGTAGCTCAAGCCTGAAGAAGGGACTAGAGAGAGCTTATGATAAGGAACCGGGTAAAGGAAAGAAACAGGCAGATGCTAATCTGAGAAGAGTCCTGCGACCATTCTTGATGTTGGGTTTTATTACAGCTGGTGTTCATTGTTCTATTGCAATCATTAAATTCTGCTTGGTTTGGGACAGTCTGTCTGGTATGCTTGAGCTGCTAGCTTTTTTCTTGGTAGAGCTATCTCTGGTGGAATATGAGATGCTGAAGTTCAAACCATCTATGCTAACTGCAGTTGTAGTCTACACAACTCAATGCACTATTAATGGTTTCAAAGACTGGAGTAAGACATGTGAATGGCATACAAACTACTCTGAAGATCAGCTATTAATTCAAGTGCACACAGGGTTGTCCACTAGCTCTAGCCTCCTACTACATATGGAAAGGTTCCTTGGCTCTTTGATCCCTTTTCCCAAGATTATAGAGCCTCATGGAGAATTTGGAAGTAGGGCATAG 903 0.4252 MRLQNVETRLKELKSALVALGREATAEIVSVEEQQQQITLQSLCTMRPIYTECRSSITNSPVAGLSSENVVNGVMVGETTASTSDWGSSSLIMNFGCEYHCLRSSITNSPVVGLSSENVVNGVMVRETIASTSDWGSSSLKKGLERAYDKEPGKGKKQADANLRRVLRPFLMLGFITAGVHCSIAIIKFCLVWDSLSGMLELLAFFLVELSLVEYEMLKFKPSMLTAVVVYTTQCTINGFKDWSKTCEWHTNYSEDQLLIQVHTGLSTSSSLLLHMERFLGSLIPFPKIIEPHGEFGSRA. 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02771 300 SUPERFAMILY Cyclin-like 193 260 IPR036915 -
Seca12g02771 300 SMART cyclin_7 184 267 IPR013763 -
Seca12g02771 300 Pfam Cyclin, C-terminal domain 199 259 IPR004367 -
Seca12g02771 300 Coils Coil 3 23 - -
Seca12g02771 300 SMART Cyclin_C_2 185 287 IPR004367 -
Seca12g02771 300 Gene3D - 173 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02771 Seca-Chr12 49200690 49204196 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g02771 200 259 Core Cell Cycle Gene Families AT1G20610 63.333 2.65e-21 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02771 K21777 - gmx:100779889 109.768