Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02676 ATGTCTGACTCATCACACCTGACTTTCTGTTTTCTTTCTTCCATTCTTGCTCTTATTGTAATCTTCATTTTCAACAAAAGAAAGAAAACAAGGCTTAATCTTCCCCCTGGCAAAATGGGATGGCCCTTTCTAGGGGAAACCATTGGATATTTGAAGCCTTACTCTGCTACTACAATAGGAGAATTTATGGAGAACCACATAGCAAGGTATGGTACAATTTACAAGTCAAACTTGTTTGGTGAGCCAGCTATAGTCTCAGCAGATGCAGAGCTGAATAGGTTCATATTACAAAACGAAGGGAAGTTGTTTGAGTGCAGCTATCCTAGAAGCATTGGAGGAATACTTGGGAAATGGTCTATGTTGGTCTTAGTAGGTGACATGCATAGAGACATGAGGAATATATCACTTAACTTTATGAGCTATGCAAGACTCAGAACAAATCTATTGAAAGAGATGGAGAAGCAGATCCTTCTAGTTCTAAACTCGTGGAAAGAAAATTGCACATTCTCAGCACTAGATGAAGCAAAGAAGTTCACTTTCAATTTGATGGCTAAGCATATCATGAGCTTGGATCCTGGGAATCTAGAGACAGAACAACTGAAGAAAGAGTATGTGTATTTCATGAAAGGTGTGGTATCTGCGCCTTTGAATTTGCCCGGAACTGCATATAGGAAAGCATTGAAGTCTAGGTCCACCATACTGAAGTTTATAGAGGGGAGAATGGAAGGAAGAATGAAGAGAAGTCAAGAGGGAAATGAAAGTTTGGAGGAAGATGATCTTCTAAACTGGGTTCTGATGCATTCAAATCTTTCAAATGAGCAAATTCTTGACTTGATTCTGAGCTTGCTATTTGCTGGCCATGAGACTTCATCAGTAGCTATAGCTCTAGCTATTTACTTCTTGGCGGGTTGTCCTGAAGCTATACAACAATTAAGGGAAGAACACAGAGAAATAGTCAGATCCAAGAAACAAGCAGGGGAGGTTGAATTAACTTGGGATGATTATAAAAGAATGGAATTTACTCATTGTGTTGTGAACGAAACACTTCGGCTGGGAAATGTAGTGAGGTTCCTTCACAGGAAGGCTCTCAAAGATGTTCGGTACAAAGGTTATGACATTCCACGTGGGTGGAAAGTCCTTCCGGTGATTTCAGCGGTGCATCTGGATCCTGCACTTTTTGACCAACCTCAACATTTCAATCCATGGAGATGGCAGGTCAGTTCTACTTATAACCATAGAAAAAAAATGCACGCCTTGCAGAGCAATAGTAAAAGTGGAAGTTGGCAAAACACAAGCAATAACTTCATGCCGTTCGGGGGAGGACCAAGGCTGTGTGCCGGATCAGAGTTAGCCAAACTTGAAATGGCAGTTTTCATCCACCATCTTATCCTCAACTACAACTGGGAACTGGTCGATGCTGATCAACCTGTTGCATACCCTTTTGTTGATTTTCCCAAAGGTCTATCCATCACAGTCCAAAAAGCCACCCACTCTTTGATATGA 1503 0.4112 MSDSSHLTFCFLSSILALIVIFIFNKRKKTRLNLPPGKMGWPFLGETIGYLKPYSATTIGEFMENHIARYGTIYKSNLFGEPAIVSADAELNRFILQNEGKLFECSYPRSIGGILGKWSMLVLVGDMHRDMRNISLNFMSYARLRTNLLKEMEKQILLVLNSWKENCTFSALDEAKKFTFNLMAKHIMSLDPGNLETEQLKKEYVYFMKGVVSAPLNLPGTAYRKALKSRSTILKFIEGRMEGRMKRSQEGNESLEEDDLLNWVLMHSNLSNEQILDLILSLLFAGHETSSVAIALAIYFLAGCPEAIQQLREEHREIVRSKKQAGEVELTWDDYKRMEFTHCVVNETLRLGNVVRFLHRKALKDVRYKGYDIPRGWKVLPVISAVHLDPALFDQPQHFNPWRWQVSSTYNHRKKMHALQSNSKSGSWQNTSNNFMPFGGGPRLCAGSELAKLEMAVFIHHLILNYNWELVDADQPVAYPFVDFPKGLSITVQKATHSLI. 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02676 500 SUPERFAMILY Cytochrome P450 31 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g02676 500 Pfam Cytochrome P450 35 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g02676 500 PANTHER CYTOCHROME P450 26 30 476 - -
Seca12g02676 500 PRINTS P450 superfamily signature 343 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g02676 500 PRINTS P450 superfamily signature 445 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g02676 500 PRINTS P450 superfamily signature 285 302 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g02676 500 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g02676 500 Gene3D Cytochrome P450 23 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g02676 500 CDD CYP90-like 66 494 - -
Seca12g02676 500 PRINTS E-class P450 group IV signature 276 302 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g02676 500 PRINTS E-class P450 group IV signature 429 445 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g02676 500 PRINTS E-class P450 group IV signature 445 463 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g02676 500 PRINTS E-class P450 group IV signature 61 84 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g02676 500 PRINTS E-class P450 group IV signature 338 354 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g02676 500 PRINTS E-class P450 group IV signature 387 405 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g02676 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Seca12g02676 500 FunFam Cytochrome P450 90B1 24 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02676 Seca-Chr12 46203426 46208642 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g02676 26 405 Cytochrome P450 AT3G50660 74.065 0.0 626
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02676 K09587 - gmx:100802498 813.527