Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca12g02670 | ATGCTTAGCCGATTGCGTCTCCGTAACCTTGTAAAACTGGTGGGATACTATAGTAGTCGTGACTCATCACAAAATCTACTTTGCTATGAGCTTGTCCTTAATGGAAGTCCCTTGGGAATAAATTGTCCTTTGGATTGGGACACCAGAATAAAAATTGCTCTTGATGTTGTAAGAGGACTTTCATACCTGCATGAAGACTCACAGCCCTGTGTAATACGCAGAGATTTCAAGGCATCCAACATATTGCTTGAGAACAATTTTCATGCTAAGGTTGCAGATTTTGGTCTTGCTAAGCAGGCACCTGAAGGCAGATCTAATTATTTGTCTACTCGTGTCATGGTCACATTTGGGTATGTAGCTCCTGAGTATGCCATGACTGGACACCTACTCGTTAAAAGTGATGTTTATAGCTATCGGTTGTCTTTCTAG | 429 | 0.4149 | MLSRLRLRNLVKLVGYYSSRDSSQNLLCYELVLNGSPLGINCPLDWDTRIKIALDVVRGLSYLHEDSQPCVIRRDFKASNILLENNFHAKVADFGLAKQAPEGRSNYLSTRVMVTFGYVAPEYAMTGHLLVKSDVYSYRLSF. | 143 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca12g02670 | 142 | PANTHER | OS01G0750732 PROTEIN | 1 | 138 | - | - | |
Seca12g02670 | 142 | ProSiteProfiles | Protein kinase domain profile. | 1 | 142 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca12g02670 | 142 | SUPERFAMILY | Protein kinase-like (PK-like) | 2 | 138 | IPR011009 | - | |
Seca12g02670 | 142 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1 | 139 | - | - | |
Seca12g02670 | 142 | FunFam | Os07g0541700 protein | 38 | 115 | - | - | |
Seca12g02670 | 142 | Pfam | Protein kinase domain | 2 | 138 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca12g02670 | Seca-Chr12 | 45667285 | 45667926 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca12g02670 | 1 | 138 | Receptor kinase-like Gene Family | AT4G02010 | 84.828 | 5.06e-82 | 253 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_Extensin | Seca12g02670 | Pkinase | 3.1e-21 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca12g02670 | - | - | dzi:111304994 | 254.603 |