Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02670 ATGCTTAGCCGATTGCGTCTCCGTAACCTTGTAAAACTGGTGGGATACTATAGTAGTCGTGACTCATCACAAAATCTACTTTGCTATGAGCTTGTCCTTAATGGAAGTCCCTTGGGAATAAATTGTCCTTTGGATTGGGACACCAGAATAAAAATTGCTCTTGATGTTGTAAGAGGACTTTCATACCTGCATGAAGACTCACAGCCCTGTGTAATACGCAGAGATTTCAAGGCATCCAACATATTGCTTGAGAACAATTTTCATGCTAAGGTTGCAGATTTTGGTCTTGCTAAGCAGGCACCTGAAGGCAGATCTAATTATTTGTCTACTCGTGTCATGGTCACATTTGGGTATGTAGCTCCTGAGTATGCCATGACTGGACACCTACTCGTTAAAAGTGATGTTTATAGCTATCGGTTGTCTTTCTAG 429 0.4149 MLSRLRLRNLVKLVGYYSSRDSSQNLLCYELVLNGSPLGINCPLDWDTRIKIALDVVRGLSYLHEDSQPCVIRRDFKASNILLENNFHAKVADFGLAKQAPEGRSNYLSTRVMVTFGYVAPEYAMTGHLLVKSDVYSYRLSF. 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02670 142 PANTHER OS01G0750732 PROTEIN 1 138 - -
Seca12g02670 142 ProSiteProfiles Protein kinase domain profile. 1 142 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca12g02670 142 SUPERFAMILY Protein kinase-like (PK-like) 2 138 IPR011009 -
Seca12g02670 142 Gene3D Transferase(Phosphotransferase) domain 1 1 139 - -
Seca12g02670 142 FunFam Os07g0541700 protein 38 115 - -
Seca12g02670 142 Pfam Protein kinase domain 2 138 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02670 Seca-Chr12 45667285 45667926 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g02670 1 138 Receptor kinase-like Gene Family AT4G02010 84.828 5.06e-82 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Seca12g02670 Pkinase 3.1e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02670 - - dzi:111304994 254.603