Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02566 ATGCTGCCAAATTTGGTGGAGTTGAACTTTGACTACTGTAATATGGTGGAATTGCCAGATGTGCTCTCTAATATTGTTTCCTTAAAGAAGCTCAGCATTACAAACTGCCATAAGCTTTCTGCCCTTCCTAAAGGAATTGGAAATTTGTTCAATTTGGAATCAGTAAGGCTTAGTTCCTGCCCTGATTTAGAAGAGCTGCCAGACTCAATCACGGGCCTTCGTGACCTAAAATTTCTTAACATCTCTGACTGCATAAGCCTTAGTAACTTACCTGAGAATATTGGGGAGTTACTTAAATTAGAAAAGCTGAATGTGAGAGGATGCTCGAGATTAAGCAAGTTGCCACCCTCAATCATGGACCTTCAGAGCTTAAGGAAAGTGGTATCTGATGAAGAGACGGCTGTATTATGGGAACCTTTCACAACCATCCTAAATTATCCATCCAGAGCTAGAGGTGGTTCAAGCTGA 468 0.4124 MLPNLVELNFDYCNMVELPDVLSNIVSLKKLSITNCHKLSALPKGIGNLFNLESVRLSSCPDLEELPDSITGLRDLKFLNISDCISLSNLPENIGELLKLEKLNVRGCSRLSKLPPSIMDLQSLRKVVSDEETAVLWEPFTTILNYPSRARGGSS. 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02566 155 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 1 145 IPR039203 GO:0050832
Seca12g02566 155 Pfam Leucine Rich Repeat 99 118 IPR001611 GO:0005515
Seca12g02566 155 SUPERFAMILY L domain-like 2 126 - -
Seca12g02566 155 Gene3D Ribonuclease Inhibitor 1 135 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02566 Seca-Chr12 41346696 41347163 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g02566 5 125 WRKY Transcription Factor Family AT4G12020 32.231 3.67e-08 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02566 - - gmx:100812310 203.756