Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02559 ATGGGAGAAATGACGCAACTTGTTGCCCTTCTAACACGATTTCAAGACACCTTGAGGAAGATCTCTCAAATGGTGGAAGCAGCTGGAAAAAGCAAAAGGACGAGACTAATTCTAAGGTCAACACTCAAGGATTTGGCTCCTCTTGTCCAACAGATCAAGAAATACAACGAACATTTGGATGCACCGAGAGAAGAAATAAAGACTCTCATCAAAGAAAAAGATGCAGGGGAAAAGGAAGAAGGGTTTGTGTGCAAATGCTCTTCCAAGAATCTCTGGTTGGAGTGGGACAAGTATTTCTCTTGGCTTTATCAGTTCTGCATGGACAGTGTTTGGCATAATTCCTCTGCTGCTTCTGATGACAAGCAAGCTCTTACGGCCAAGGATGTTAGAGACACACTTAATGAGGTGAGAGAAATTCTTGAGCTTCTTAACAGAGAAAACTTTGAGCAGAAATTTATTGGAGCTGGTGCACCAATCATCAAACGCCCTTTTGGTGTTCCTGAAAGCCCAGAATTCACTGTTGGGTTGGATTTACCATTGAACAAGTTGAAGATGGAGCTTCTCAAGAAGGATGGTGTGTCCATCCTTGTGTTGACTGGCTTGGGAGGTTCCGGAAAAACCACTTTGGCAACCAAGCTCTGCTGGGATGAACAAGTCAAGGGTAAATTCATGGAAAATATTTTATTTGTCACCTTCTCACAAACGCCCAAGTTGAAGATTATTATAGAAAGACTACTTGAACACTTTGGATATCCAGTGCCTGAGTTTCAAAGCGACGACGATGCAGTGAATCGATTGGGACTTGTGTTGAGGAAAAATGAGGGAAGTCCAATGTTGCTGGTCCTGGATGATGTTTGGCCTGGCTCAGAAGACCTCATTGAGAAATTTAAATTCCAAATACCAGATTATAAAATTTTAGTGACTTCAAGGGTTGCATTTCCTAGATTTGGCACAACATGCATCCTAAAACCTCTTGTTCATGAAGATGCAATAACCCTTTTCCGCCACTACGCACTCTTGGAAAAAAGCACTTCAAATGTTCCTGACGAAGATCTTGTCCAAAAGATTGTGAGAAATTGCAAGGGTTTACCGCTTGCCATTAAAGTGATTGGTACATCACTCAGTTGTAGGCCTTATGGGTTGTGGCAAAAGTTAGCGAAGGAACTGTCACAAGGTCATTCTATACTTGATTCTAATACTGAATTACTTACTCACCTTCAAAAGATCTTTGATGTTTTAGAAGATAATAATTCTGTCATCAAGGAGTGCTTCATGGATCTAGCGTTATTCCCTGAAGACCAAAGAATTCCTGCTACCGTTCTCATTGATTTGTGGGCAGAGTTGTATGGACTAGATGATGACGGCATGGATGCAACGTCCATCATCAACAAATTAGACTCCATGAATCTGGCTAATGTCTTAATAGCAAGGAAAAATGCAAGTGACACAGACAATTACTGCTACAATAACCACTTCGTTGTCCTTCATGATCTTCTAAGAGAGTTTGGGATTTGTCAAGGCATTCAGGGGCCAATTGAACAGAGAAAAAGACTAATTATTGACATAAATGAAAATAAATGTGAATGGTGGCTGGGGGAGAAGCAGCAAGGCATGATGGTTCGCATATTGTCAAAATTACTTAGATGGAGTATCAAACAAAGTCCCCAACAGGTCCCTGCCCGCACATTGTCTATATCAACTGATGAAACTTGCGCTTCATATTGGTCTCACATGCAACCAATTCAAGCTGAGGTACTCATTTTAAATCTTCGAACAAAGCAATACTCCTTTCAAGAGTTCATAGAGTTCATGGAGAAACTGAGCAAACTAAAAGTTCTGATTGTTACAAATTACGGTTTCCATCCTTCTGAACTGAACAATACCAAGCTACTTGGCTCTTTATCCAGCCTGAAAAGAATAAGACTAGAGAGGATTTCTATTCCTTCATTTGGCACGTTGAAGAATCTTAAGAAACTATCCCTCTACATGTGTAATACGAGTCATGCTTTTGGAAACGGTATGATCCTAAGTTCTAATGCATTTCCAAATCTAGAAGATTTGAACATTGACTATTGCAAAGATTTGGTGGAATTGCCTTCTGGGGTCTGTGATATTACCCCACTAAAGAAGCTCAGTATTACTAATTGCCACAAGCTTTCTGCGCTGCCCCAAGAAATTGGAAAGTTGGAGAATTTAGAACTATTAAGGCTGAGTTCCTGTACTGATTTGGAAGGAATACCAGATTCTATTGGAAGGCTTTCAAATCTAAGACTTCTTGACATCTCAAACTGCATAAGCCTTCCAAATTTACCGGAGGAAATTGGCAATCTGTGTAATCTAAGAAATCTCTACATGACAAGTTGTGCAATGTGTGAATTGCCATTCTCAGTGGTTAATCTCGAGAATTTAAAGGTGATATGCGATGAAGAGACGGCTACTTCATGGGACACATTTAAACCTATGATTTCCAATTTAAAGATAGAGGTTCCTCAAGTTGATGTTAACTTAAACTGGCTTCACTCAATTCGCTCCTAA 2535 0.4012 MGEMTQLVALLTRFQDTLRKISQMVEAAGKSKRTRLILRSTLKDLAPLVQQIKKYNEHLDAPREEIKTLIKEKDAGEKEEGFVCKCSSKNLWLEWDKYFSWLYQFCMDSVWHNSSAASDDKQALTAKDVRDTLNEVREILELLNRENFEQKFIGAGAPIIKRPFGVPESPEFTVGLDLPLNKLKMELLKKDGVSILVLTGLGGSGKTTLATKLCWDEQVKGKFMENILFVTFSQTPKLKIIIERLLEHFGYPVPEFQSDDDAVNRLGLVLRKNEGSPMLLVLDDVWPGSEDLIEKFKFQIPDYKILVTSRVAFPRFGTTCILKPLVHEDAITLFRHYALLEKSTSNVPDEDLVQKIVRNCKGLPLAIKVIGTSLSCRPYGLWQKLAKELSQGHSILDSNTELLTHLQKIFDVLEDNNSVIKECFMDLALFPEDQRIPATVLIDLWAELYGLDDDGMDATSIINKLDSMNLANVLIARKNASDTDNYCYNNHFVVLHDLLREFGICQGIQGPIEQRKRLIIDINENKCEWWLGEKQQGMMVRILSKLLRWSIKQSPQQVPARTLSISTDETCASYWSHMQPIQAEVLILNLRTKQYSFQEFIEFMEKLSKLKVLIVTNYGFHPSELNNTKLLGSLSSLKRIRLERISIPSFGTLKNLKKLSLYMCNTSHAFGNGMILSSNAFPNLEDLNIDYCKDLVELPSGVCDITPLKKLSITNCHKLSALPQEIGKLENLELLRLSSCTDLEGIPDSIGRLSNLRLLDISNCISLPNLPEEIGNLCNLRNLYMTSCAMCELPFSVVNLENLKVICDEETATSWDTFKPMISNLKIEVPQVDVNLNWLHSIRS. 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02559 844 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 161 427 IPR027417 -
Seca12g02559 844 Gene3D - 325 409 IPR042197 -
Seca12g02559 844 PRINTS Disease resistance protein signature 195 210 - -
Seca12g02559 844 PRINTS Disease resistance protein signature 360 374 - -
Seca12g02559 844 PRINTS Disease resistance protein signature 751 767 - -
Seca12g02559 844 PRINTS Disease resistance protein signature 272 286 - -
Seca12g02559 844 SUPERFAMILY RNI-like 589 806 - -
Seca12g02559 844 Gene3D - 410 504 IPR036388 -
Seca12g02559 844 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 9 839 IPR039203 GO:0050832
Seca12g02559 844 Coils Coil 126 146 - -
Seca12g02559 844 Gene3D Ribonuclease Inhibitor 551 825 IPR032675 -
Seca12g02559 844 Gene3D - 160 313 IPR027417 -
Seca12g02559 844 Pfam NB-ARC domain 180 393 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02559 Seca-Chr12 41100626 41104807 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g02559 633 803 WRKY Transcription Factor Family AT4G12020 29.231 2.45e-08 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02559 - - gmx:112997603 1108.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g02559 12 41100626 41104807 Seca12g02559 12 41100626 41104807 ECH