Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02543 ATGAGTGGTATGGCTCCGATCACGGAGAAATGTCTCTCTTCAATCTTCAAATTACAACATCTTGAAGATTTGGTCCTTGAAGGATGCTTTGGCATTGATGATGACAGCCTCAAGAATGATAACACTGAACAACAAGTTCAAGGTGTCTTAAACCTGATTGATCTGGCTGGAAGTGAAAGACTGTCAAGGAGTGGAGCAACTGGGGACCGGTTGAAGGAAACTCAGGCTATCAACATAAGTATCTCCTCTTTGAGTGATGTCATATTTGCTTTTGCAAAGAAAAAGGAGCATGTTCCTTTTAGGAATTCAAAACTGACATACCTTCTCCAGGATTCCCTTTAG 342 0.4123 MSGMAPITEKCLSSIFKLQHLEDLVLEGCFGIDDDSLKNDNTEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINISISSLSDVIFAFAKKKEHVPFRNSKLTYLLQDSL. 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02543 113 Gene3D Kinesin motor domain 15 113 IPR036961 -
Seca12g02543 113 PANTHER KINESIN-LIKE PROTEIN KLP-3 38 113 IPR027640 GO:0003777|GO:0007018
Seca12g02543 113 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 41 113 IPR027417 -
Seca12g02543 113 ProSitePatterns Kinesin motor domain signature. 48 59 IPR019821 GO:0003777|GO:0005524|GO:0007018
Seca12g02543 113 ProSiteProfiles Kinesin motor domain profile. 1 113 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca12g02543 113 Pfam Kinesin motor domain 37 113 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca12g02543 113 PRINTS Kinesin heavy chain signature 98 113 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca12g02543 113 PRINTS Kinesin heavy chain signature 49 67 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca12g02543 113 SMART kinesin_4 4 113 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02543 Seca-Chr12 40789473 40791966 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g02543 42 113 Calmodulin-binding Proteins AT5G65930 51.389 5.81e-19 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02543 K10405 - gmx:100818473 130.954