Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02530 ATGGGGTGTATCTCTAATAATCATTCTTTTGTTCTCTTGATTTGGCTTGTATTGAATAGTCCTCTGGTATGCTGTCAACTTAGATATGATTTCTATGACACAGCTTGTCCATTCCTGACTCATATTGTTCGAACTTCACTCTTGTCAGCTATGGTCAATGAACCAAGGATTGCTGCTTCTCTCTTGCGCCTTCATTTCCATGATTGTTTTGCCAATGGATGTGATGGATCTGTGCTACTAGATGATACCAGCTATTTTACTGGGGAGAAAAATGCACCTCCTAATCGAAATTCAATTAGAGGATTTGAGTTTATTGACAAACTCAAGTATGAAATAGAGTATCATTGTCCATCCACCGTGTCATGTGCTGATTTACTAGCTATAGTAGCGAGAGAAGCTGTAAATCTTAGTATAGGAACATTCATTTACTCGCCCACACTCCTTGGTCGTAGAGATGGCACAACTGCAAGCAGAAGTGAGGCTAATCAGTTGCCTTCACCCTTTGACACCCTAGAAACTATTACTACCAAGTTCAATTCCAAGGGTCTTAACATCAAGGATGTAGTAGTACTCTCAGGAGCCCACACCATAGGCTTTGCTCAGTGCTTTACATTCAAGCATAGGCTCTTCAACTTTAATGGCACTGGTAAACCTGATCCATCAATTAATCCTATACTTCTACCAAGTTTGCAGATGTTATGCCCGGATAGTGGTATTAACACCACTCTTGCTCCCTTGGATGTTGTCACTGCCAAATACTTTGATAGCACGTATTACATAGACCTTGTGAAGAATTTTGGGATACTACAGACAGATCAAGCTCTTATGCGTGATAAAACCACTGCTTCATTGGTCATCAAGTATAGTAGTGAGTACACTTCTCACTTTTATAAGGACTTCACAAAATCTCTTGAGAAGATGGGCCAGATTGGTGTGCTTACAGGACAACAGGGGGAGATAAGGAAAAATTGTAGGGTTGTGAACTACAACTAA 993 0.4038 MGCISNNHSFVLLIWLVLNSPLVCCQLRYDFYDTACPFLTHIVRTSLLSAMVNEPRIAASLLRLHFHDCFANGCDGSVLLDDTSYFTGEKNAPPNRNSIRGFEFIDKLKYEIEYHCPSTVSCADLLAIVAREAVNLSIGTFIYSPTLLGRRDGTTASRSEANQLPSPFDTLETITTKFNSKGLNIKDVVVLSGAHTIGFAQCFTFKHRLFNFNGTGKPDPSINPILLPSLQMLCPDSGINTTLAPLDVVTAKYFDSTYYIDLVKNFGILQTDQALMRDKTTASLVIKYSSEYTSHFYKDFTKSLEKMGQIGVLTGQQGEIRKNCRVVNYN. 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02530 330 PANTHER PEROXIDASE 72-RELATED 25 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g02530 330 Pfam Peroxidase 45 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca12g02530 330 Gene3D Peroxidase, domain 2 165 307 - -
Seca12g02530 330 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g02530 330 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g02530 330 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g02530 330 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g02530 330 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g02530 330 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g02530 330 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g02530 330 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g02530 330 FunFam Peroxidase 165 307 - -
Seca12g02530 330 CDD secretory_peroxidase 26 327 IPR033905 GO:0004601|GO:0042744
Seca12g02530 330 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Seca12g02530 330 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Seca12g02530 330 Gene3D - 30 328 - -
Seca12g02530 330 ProSiteProfiles Plant heme peroxidase family profile. 26 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca12g02530 330 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca12g02530 330 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca12g02530 330 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca12g02530 330 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca12g02530 330 SUPERFAMILY Heme-dependent peroxidases 26 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02530 Seca-Chr12 39860586 39862580 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g02530 26 324 Peroxidase AT1G49570 56.106 7.19e-114 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02530 K00430 - gmx:100789642 448.358