Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02495 ATGCGTGTTCTTTTTGTTGACGGAGACCAAACTGGTCTAAAAGTGTCGGAGAACCTGCTTCGCAATGACAGTATCACGGTTACTACAACTACTCAAGCAATTAAGGCACTAGAAATATTGAGGAAAAACAAAAATGAGTTTAAGCTGGTTATTACTTCTATAAAAATGGAAGATATGGATTGTTTCAAATTTCTTGAACAAGTGGTACTTGAAATGGACTTACCAATGATTAGTAAGTTCAAACACAATTGTCTTAATATGTATTTAACAGGTAGTACGTATGGAACATGTTACTGTTTAATAAAACCAGTTAGAATTGAAGTGTTGCACAACATATGGCAAAATGTAGTAAACAAAAAGATTAATTGGAAGGATAAGAATGTGGCTGCCAATAAAGAGAAAATCTACAATATGGTTGTGAAAAATATTCAAAGTATTATCACATCAAATAACAATATTAACTATAGTAATTTGGTAGGTAAAAAGAGGAAGAAACAAGGTGAGCAAAATGAAGACCATGATAAAGAGAATGGAGAGGAGAATGAGAAAGCCTCCACTAGGAATAAGTCTCGTTTGGTTTGGACTGTTGAACTACATAGAAAAATTGTTTTTGCAGTAAACCAACTTGGTTTTGGTAGTAAGTTTAGTGACAATGAATATTTTTTTTTGTTATTTTGA 678 0.3215 MRVLFVDGDQTGLKVSENLLRNDSITVTTTTQAIKALEILRKNKNEFKLVITSIKMEDMDCFKFLEQVVLEMDLPMISKFKHNCLNMYLTGSTYGTCYCLIKPVRIEVLHNIWQNVVNKKINWKDKNVAANKEKIYNMVVKNIQSIITSNNNINYSNLVGKKRKKQGEQNEDHDKENGEENEKASTRNKSRLVWTVELHRKIVFAVNQLGFGSKFSDNEYFFLLF. 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02495 225 SUPERFAMILY CheY-like 1 125 IPR011006 -
Seca12g02495 225 Gene3D - 185 219 - -
Seca12g02495 225 CDD REC_typeB_ARR-like 3 117 - -
Seca12g02495 225 ProSiteProfiles Response regulatory domain profile. 2 117 IPR001789 GO:0000160
Seca12g02495 225 Gene3D - 1 137 - -
Seca12g02495 225 PANTHER TWO-COMPONENT RESPONSE REGULATOR 1 209 IPR045279 GO:0009736
Seca12g02495 225 Pfam Response regulator receiver domain 3 111 IPR001789 GO:0000160
Seca12g02495 225 MobiDBLite consensus disorder prediction 161 186 - -
Seca12g02495 225 MobiDBLite consensus disorder prediction 158 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02495 Seca-Chr12 38067526 38073068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g02495 1 211 Response Regulator Gene Family AT2G25180 46.759 5.03e-47 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Seca12g02495 Response_reg 5.3e-08 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02495 K14491 - gmx:100776075 186.808