Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02494 ATGGTTGTGAAAGATATTCAAAGTATCATCACATCAAATAACAATATTAACTATAGTAAATTGGTAGGTAAAAAGAGGAAGAAACAAGGTGAGCAAAATGAAGACCATGATAAAGAGAATGGAGAGGAGAATGAGGATGCCTCAACTAGGAAGAAGTCTCGTTTAGTTTGGATTACTGAACTACATAGAAAACTTGTTTTTGCAGTAAACCAACTTGGTGTTGATAAGGATGTTAGAGCTCAGATAAAATGCCAAGAAGATTTACTAGAAAACAAATCTCCATCATACGGATTTGCTGGAACATATTATTGGCCTAATGAAGGTTGGAGTGAGACTCAGACTCAGTTACCTAATTTTCTTGTCCATTCATCTCCATTAAGTGAAGTTTTAAAAAATGATCAACAACATACTTACAATTTCTTGAAATTTTCCTCCTCAAATTTTCTTGTTGAGAGATGTACATCAATTTTTTCTTCCCGAAGTGCTTTTGTTGATTCTTTAGAGAATATTAGAGCTCAGATTGAAGGCCAAGAAGACTTACTAGAAATATCTTCCCCCAGCAGTTGTGTTGGTCCTCCTTTGGAGGATGCTAGATCTGAATAG 603 0.3499 MVVKDIQSIITSNNNINYSKLVGKKRKKQGEQNEDHDKENGEENEDASTRKKSRLVWITELHRKLVFAVNQLGVDKDVRAQIKCQEDLLENKSPSYGFAGTYYWPNEGWSETQTQLPNFLVHSSPLSEVLKNDQQHTYNFLKFSSSNFLVERCTSIFSSRSAFVDSLENIRAQIEGQEDLLEISSPSSCVGPPLEDARSE. 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02494 200 MobiDBLite consensus disorder prediction 24 49 - -
Seca12g02494 200 Gene3D - 48 94 - -
Seca12g02494 200 MobiDBLite consensus disorder prediction 21 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02494 Seca-Chr12 38064483 38066254 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g02494 13 82 Response Regulator Gene Family AT4G16110 42.857 1.57e-09 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Seca12g02494 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02494 - K14491 vvi:100259369 78.1814