Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02468 ATGAGTCTATCGAGCGAGCTTCGAACAAATCCGAAAGAGGTGGAGAAGAAGAAGCCAACAACACAAACCACCCAGCCTCACTGCATTCTATCGACGCCTCAGAAGATGCCAACTGAGTCTGAGCTTGAAGAATTCTTCGCTGCCGCTGAGAAAGACATTCAGAAACAGTTTTTAAATAAGTATAATTATGATATTGTGAAGGACGTGCCATTGGAAGGGCGTTACGAGTGGGTTCAATTGAAGCCGTAA 249 0.4458 MSLSSELRTNPKEVEKKKPTTQTTQPHCILSTPQKMPTESELEEFFAAAEKDIQKQFLNKYNYDIVKDVPLEGRYEWVQLKP. 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02468 82 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 3 81 IPR044275 GO:0004861|GO:0045736|GO:0051726
Seca12g02468 82 Gene3D p27 30 82 IPR044898 -
Seca12g02468 82 PIRSF CKI_KRP_plant 2 82 IPR044275 GO:0004861|GO:0045736|GO:0051726
Seca12g02468 82 MobiDBLite consensus disorder prediction 21 35 - -
Seca12g02468 82 MobiDBLite consensus disorder prediction 1 35 - -
Seca12g02468 82 Pfam Cyclin-dependent kinase inhibitor 36 80 IPR003175 GO:0004861|GO:0005634|GO:0051726
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02468 Seca-Chr12 37433959 37434721 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g02468 36 82 Core Cell Cycle Gene Families AT5G48820 65.957 6.25e-19 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02468 - - ccaj:109818608 105.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g02468 12 37433959 37434721 Seca12g02468 12 37433959 37434721 ECH