Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02453 ATGGAATTTAACAAGGACTTTATGGATGGTTGTTCTACATTTTGGACTGATGAAAATTGTGAGAGCAACCAAGATGAGTCACGTAATGGGGATGGAAACCCGGTGGGAGACCAAGGTGGGCTGTCATGGGGCGGGAGGATGATACATGAACTAACACATGATGACATTAGACGTCTGGAGTTCGGTTCTGAGGGTGAGGCATATAGTTTTTATTCTGATTATGCCAAACAACGAGGGTTTGCTGTGAGGAAAGATGATATTGAGCGAAATGAGAATGGTGATATTGTTAAGCGGTATTTAGTGTGTAATAAGGAGGGAACAAGGGACAAGAAACACTTGGAGAGAAAGGACAGAGTGAGGGAGGCGAGGCCAATTACTCATGTGCAGTGCACAACAAGGATGTGTGTTTACTTAGATATGAGGAGTGGGAAATGGAAGGTGTCTGCATTCCACGACTATCATAACCATGAGTTAACTCCTCCAACGTATGTTCACATGATGCCAGCTTATAGATAA 516 0.4341 MEFNKDFMDGCSTFWTDENCESNQDESRNGDGNPVGDQGGLSWGGRMIHELTHDDIRRLEFGSEGEAYSFYSDYAKQRGFAVRKDDIERNENGDIVKRYLVCNKEGTRDKKHLERKDRVREARPITHVQCTTRMCVYLDMRSGKWKVSAFHDYHNHELTPPTYVHMMPAYR. 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02453 171 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 31 160 - -
Seca12g02453 171 Pfam FAR1 DNA-binding domain 69 159 IPR004330 -
Seca12g02453 171 MobiDBLite consensus disorder prediction 18 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02453 Seca-Chr12 37049019 37049534 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca12g02453 FAR1 3.3e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02453 - - ccaj:109792835 148.288