Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02448 ATGGGGGTGCAGGTTGATCCCAAATTAATCTTTAAGATTGAAAAGCAGGAAATGGTAATTGGCATAGTAGGCCATTTGACTTCTATAGTGCTTAGCAGAGCAGTTTTAAATGTTGTTGACATAATCAACCCTCTAGGATCTGAAGAGGCTAGTGTTCATGGTTTGGTAGTTGTTGGTGCCCTGACTGCATTTCCTGTTATAAGTAGTTTCCTCAATGAGATGAACATTCTCAATTCAGAGGTTGGACGCATGGCTTTATCTACTTCCATGCTAGCCATGGCCTCTGAGAGAACCAACTTCAATGAGGATACCAAGAAACCCCTTTGTGCTTGTGAGGAATCTAAAGCTGAACCTGGCAGAAGTAGAGGAAGAAAGAACAATGTGAAGGGTCCTAAGAAAGCACCACAGAGAGGCTTGGGTATGGAAAAGTTGGAGAGGTTGAGGATTCAAGAGTCTTGGAAAAAGATGGCTGAAGCATCTGGAGTTCCAACCCTCCAATATTTGGCAGTGGAAGTGTTCCCATGA 525 0.4324 MGVQVDPKLIFKIEKQEMVIGIVGHLTSIVLSRAVLNVVDIINPLGSEEASVHGLVVVGALTAFPVISSFLNEMNILNSEVGRMALSTSMLAMASERTNFNEDTKKPLCACEESKAEPGRSRGRKNNVKGPKKAPQRGLGMEKLERLRIQESWKKMAEASGVPTLQYLAVEVFP. 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02448 174 PANTHER CATION/H + ANTIPORTER 1 91 - -
Seca12g02448 174 Gene3D - 1 94 IPR038770 -
Seca12g02448 174 MobiDBLite consensus disorder prediction 113 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02448 Seca-Chr12 37027579 37028569 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g02448 1 92 Antiporter Super Family AT5G22910 30.303 3.06e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02448 K26731 - gmx:100804488 111.309