Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02428 ATGAGCGTGGCCTTTCTTGTTGGACAGTCGCGATTTGATTGGAATTGCGGCCATTTGATCAGGAAGCGGAAGAGTAAAGCTTCCAAGGGTCGGATTCCTCTTTACCTCGTGCTCTCTCCCACTAGGGAGCTAGCTCAACAATGCAAGGAGCCTGATGCTGCCTCTTTCAATCTGGACAAGAGTAAACACTACACCACAAACTACATTTTGTTAAGGAAATGGGTAGTCTGTCTTGATCCAAATCTTCAACTTCAGGATATCCTCACCGGCGTAAGCTTTTCCTCTGGTGGTTCTGGATATGATCCTCTAACTTCTGAACTAGTGTCTGTGGTATCTTTATCAGATCAATTGGACATGTTTAGGGAGTACAAAGAGAAGAACAACAAGCATAATATCAAAGAGCATATACATAGTGTGCATATAGGAAGTGATGACATTGCCAACACTTGTTCTCAAACGCCAATTAGACTAGCACACTATGAAATTCCATCATACACAGACTTAATGGTTTTTCAACCCTCAAACTTCTTGCAAGAAGTTTATGGATTGGGAGCTAGAAGGATTGGAGTTATTGGTTTGCCACCAACAGGGTATGTCATGTGTATATACTTCAAGAATTTGATATTTGATTGA 633 0.4139 MSVAFLVGQSRFDWNCGHLIRKRKSKASKGRIPLYLVLSPTRELAQQCKEPDAASFNLDKSKHYTTNYILLRKWVVCLDPNLQLQDILTGVSFSSGGSGYDPLTSELVSVVSLSDQLDMFREYKEKNNKHNIKEHIHSVHIGSDDIANTCSQTPIRLAHYEIPSYTDLMVFQPSNFLQEVYGLGARRIGVIGLPPTGYVMCIYFKNLIFD. 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02428 210 Gene3D SGNH hydrolase 41 205 IPR036514 -
Seca12g02428 210 PANTHER GDSL ESTERASE/LIPASE EXL3 77 199 - -
Seca12g02428 210 Pfam GDSL-like Lipase/Acylhydrolase 81 198 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02428 Seca-Chr12 36514729 36518205 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g02428 85 197 Pollen Coat Proteome AT1G75930 32.787 1.02e-13 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02428 - - gmx:102668883 147.902