Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02426 ATGCTACCAACTCTGTTGCTCAACGTGTCCAATGTCCACAATTATATAAATTCAGTTTTGAAACACCAAGGAGGAACTTTCATGTTCAAAGGACCTTGGCTAACAAACATGAACATTGTTTTTACCAGTGACCCTATGAACGTGCACCACATCACAAGCACAAAGTTCGAAAACTATGGGAAAGGGAGTGATTTCAGAGAGATTTTTGAAATTCTAGGAGACGGGATTTTCAGGTCTGATTTCGAGACATGGAAGTACAATAGAACCATACTTCATTCAATTTTCAAGAAGAAGGTTGATCACTGTCTACTTCCATTTCTTGATCATGCATGGAAGGAAGGAGTGCAAATAGACTTACAAGATGCTTTTCAAAGGTTAACCTTTGATAACATTTGCTCTACAGTTTTAGGATTTGATCCTAATTGCCTTTCCATTGAACTCCCAGAAGTTGCATGTGAGAAAGCCTTCAATGAAGCAGAGGATGCATTGTTCCATAGACATATCAAGCCAAGATGCTGGTGGGAGCTGCAAAAATGGCTCCAAGTTGGAACAGAGAAGAAGTTCAGAGAAAACCAGAGAACTATTGACCAAATGTTGTATGCAAAAATCACATCCAAACACAAAATGCAAGGCCAAAGTACTGATGAGTCACAACTTGACTTGCTAAGTATCATTATAAAAGAAGTAGGAAATGGACAAATGGATGACAAGTTTTTGAGAGACACAGCAATAAATCTCCTTGCAGCTGGGAGAGACACCATCAGTGCAGGCCTCACTTGGTTTTTCTGGCTAGTTGCAACACACCCTTCTGTTGAAGCTAAGATTCTTGAAGAGATCCGAGAAAATTTATGTGAAAGTAATTGGAAGGATTTAGGTGTGGAAGGGCTTAAAAGGTTAGTTTACCTCCATGGAGCTGTATGTGAAGCCTTGAGGCTTTATCCCCCAATACCTTTTGAGCACAAGTGTGCACTAAAATCTGATGTGCTTCCTAGTGGCCATCTCATTAAGTCAAATACCATGATAATGTACTCCCTATACTCAATGGGAAGGATGGAGGAAATATGGGGAGAAGATTGCTTGAAATTTAGACCAGAGAGGTGGATTTCTAACAGAGGAGGGATTATTCATGTACCCTCTTACAAATTCATTGCTTTCAATGCAGGACCAAGAAGTAGTTTGGGTAAGGACATAAGCTTCATTCAAATGAAGATGGTTGCTGCTCCTATATTGTGGAATTATCATATCCAATTGGTGGAAGGCCACCCCATATCTCCAAGTGTTTCTGTTGTCTTTCATATGAAACATGGCTTGAAGGTTATGGTGACAAAAAGAAGCATTTGA 1341 0.3975 MLPTLLLNVSNVHNYINSVLKHQGGTFMFKGPWLTNMNIVFTSDPMNVHHITSTKFENYGKGSDFREIFEILGDGIFRSDFETWKYNRTILHSIFKKKVDHCLLPFLDHAWKEGVQIDLQDAFQRLTFDNICSTVLGFDPNCLSIELPEVACEKAFNEAEDALFHRHIKPRCWWELQKWLQVGTEKKFRENQRTIDQMLYAKITSKHKMQGQSTDESQLDLLSIIIKEVGNGQMDDKFLRDTAINLLAAGRDTISAGLTWFFWLVATHPSVEAKILEEIRENLCESNWKDLGVEGLKRLVYLHGAVCEALRLYPPIPFEHKCALKSDVLPSGHLIKSNTMIMYSLYSMGRMEEIWGEDCLKFRPERWISNRGGIIHVPSYKFIAFNAGPRSSLGKDISFIQMKMVAAPILWNYHIQLVEGHPISPSVSVVFHMKHGLKVMVTKRSI. 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02426 446 PRINTS E-class P450 group I signature 392 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g02426 446 PRINTS E-class P450 group I signature 258 284 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g02426 446 PRINTS E-class P450 group I signature 382 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g02426 446 PRINTS E-class P450 group I signature 238 255 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g02426 446 Pfam Cytochrome P450 11 426 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g02426 446 CDD CYP86A 27 437 - -
Seca12g02426 446 Gene3D Cytochrome P450 4 445 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g02426 446 SUPERFAMILY Cytochrome P450 4 444 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g02426 446 PANTHER CYTOCHROME P450 2 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02426 Seca-Chr12 36337689 36339090 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g02426 1 446 Cytochrome P450 AT4G39490 45.397 3.77e-151 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02426 - - gmx:100785815 693.73